Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq16 479 2e-130
seq5 161 8e-35
>seq16
Length=840418
Score = 479 bits (530), Expect = 2e-130
Identities = 1251/1884 (66%), Gaps = 62/1884 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||| || || | | | || ||| |||| | |||||||||||||| |||
Sbjct 25750 TCGACAGTGAATTGAATGGGAGCCGAGGCAGCCATGGTACGGAGATAGTACATGCCAGTC 25809
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196
||||| ||||| ||| || || ||||| || | | || |||| | | | |||||
Sbjct 25810 TTGAGACCAGCCTTCCAGCCAGCAAAGTGCATAGAAG-TGATCTTGCCCATAGTAGGCTC 25868
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||||||| ||| || ||| || |||||| || || |||||
Sbjct 25869 CTTCATGTGGATGTTTAGCGACTGAGACTGGTCAATGAAAGCACCACGGTCAGCGGCCAT 25928
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGG--CGACGTA-CCTC 65313
|||||||| | || ||| |||||||||||||||||||| ||| | || ||||
Sbjct 25929 CTCAATGATCCTTCGCTGCGAGATCTCCCAGACGGTCTTGTAAAGGGTCTTTGTCTCCTC 25988
Query 65314 AATTGGAATCTCCTCAATGTCCTGG--ACTGAACCACGACGTGCAATAATGCGATTACGC 65371
| || || | ||| ||||| | ||||| | | || || || || || |
Sbjct 25989 A---GGGATGTTGGGAAT--CCTGGCAATCGAACCTCCATCGGCGATGATACGGTTCTTC 26043
Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGAT 65427
|| ||| ||||||| ||||| |||| ||| | |||| |||| | | ||||
Sbjct 26044 ATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCATGGG----TTGAC 26099
Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487
|| |||||||| || | || ||||| ||| |||||||||||| ||| || || ||
Sbjct 26100 AACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCGAA 26159
Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547
| | || ||||||| ||||| || | ||| || |||||||||||||| || | | ||
Sbjct 26160 GCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGCAG 26219
Query 65548 TGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACA--T 65604
||||| || | |||| | |||| || | || | || |||||| ||| | |
Sbjct 26220 CGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACG-CCCAGTCCCAGAGGT 26278
Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG---- 65660
| || | || ||||| | |||||||| | || ||| | || ||||
Sbjct 26279 CAGTAGGT-GT-GACATTC------CACATATCGTACTGGAGGATACC----CTGGGATA 26326
Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720
| || || || | | | | ||| || ||||| || | | || ||
Sbjct 26327 CGGGAGATCCTTCGTAGGTCTTGTAAGGACCAAGTTCCTTTGCGATGTCGCATGAGGAAG 26386
Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780
||| || ||| || ||||||||||| || | || || | || || ||
Sbjct 26387 TGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTG 26446
Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|||| | || | | | || || | ||||| ||||||||||| || |||||||
Sbjct 26447 ACTCGAAAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGA 26506
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || || || ||| || | ||||| |||||||||| |||| ||||
Sbjct 26507 TGGGTCGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGA 26566
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCA 65959
| || ||||| ||||| || || || || || | ||| | || || ||| |||
Sbjct 26567 TGATCTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTT-GAAGTCA 26625
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
|| ||| ||| || | | ||||| || ||||||||||| ||
Sbjct 26626 AAC--------ACGC-CGGCCTTGTAGT---CGACAAAAGAAGGCAGGGCAAGAGAAGCC 26673
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
| |||||| ||||| | ||| ||||||||||| ||||| ||||| || |||||||| ||
Sbjct 26674 AAGTTGCAAACAGCGACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTG 26733
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| ||||| || | |||| || || |||||||| ||||| || ||||||||
Sbjct 26734 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAG 26793
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| ||| | || | || ||||| || | ||||| |||||||| |||||| ||
Sbjct 26794 AGCATAAAGGGGTTACCAGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGT 26853
Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAA 66258
|| || || | | |||| | ||| | ||||| ||||| || ||||||
Sbjct 26854 GCGCGAACAGT-CTCGCGACCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGAGCTTCGAA 26912
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|||||| | || |||| || | || |||| || || |||||||| | ||| |
Sbjct 26913 TTCTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTT 26972
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|| | | || ||||| ||| || || ||||| ||||| || ||||||||||||||
Sbjct 26973 GCCGTTGTCTTGAACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATC 27032
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
||| || || |||||| ||||||| || ||||||| ||| ||||| |||||| |||
Sbjct 27033 GCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGCCAAAGACGTC 27092
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
|| |||||||| || |||||||||||||| | || ||| ||| |||||| |||||
Sbjct 27093 AGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTC 27152
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
||| |||||||| |||||| | ||||| | ||| || | ||| || |||||| | ||
Sbjct 27153 GACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCATTAGATGTTCC 27212
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| ||||| ||||| || || || || || ||| || || || ||||||||
Sbjct 27213 GTTAGTGCCACCGATGTATGAGCCAGTAGCACGAATGCGGTGCACGTTGAGGCCAATACC 27272
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAAT 66675
|| || ||||| ||||| ||||| || | | ||| | | |||||||| ||
Sbjct 27273 GCCAGCGGTCTTGGAGATCAACGCACA---GGTCTTGAGTGTGTCGTAAATGCCGTCGAT 27329
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
| ||| |||| ||| | |||| ||||||| | ||| ||| |||||| | ||
Sbjct 27330 GCTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGTGGTGATGGTGTGCCCGC 27389
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
||| | || || | ||||| || ||||| | |||||||||| | ||| |||||
Sbjct 27390 GTTGAACAACGTCGGCGAGGCGTGTGTGAAGTACTTTTGAGACATGTAGTCGTAGGTCTC 27449
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855
|||| | || |||| ||||| ||||| || | ||| ||||| || | || |||
Sbjct 27450 GATGGCCTTCTCGATGTCATCGCCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTG 27509
Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915
|| || ||| | | | | || || | | | || || ||||| || |||||||
Sbjct 27510 TGGGCGCTCGGCGACCTTGCCGTTTATGCGGAGGAGATATGAACGTTCGAGTGTCTTGAA 27569
Query 66916 ACCAAAGTACGAGTAATTGAAATC 66939
||||||| || ||| ||||| ||
Sbjct 27570 ACCAAAGAACTGGTAGTTGAAGTC 27593
>seq5
Length=1540376
Score = 161 bits (178), Expect = 8e-35
Identities = 562/857 (66%), Gaps = 30/857 (4%)
Strand=Plus/Minus
Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149
|||| |||||||| ||||| || ||||| |||||||| | |||||| |||| | |||
Sbjct 776247 TGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCAGAGGAGATCGACCTCTCC 776188
Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205
|| ||| | | |||||| | |||| | | ||| | || | ||||| ||
Sbjct 776187 AAGGACCTTCACGACTGGAACAAGCGTCTCAACGAT-GACGAGCGCTTCTTCATCTCCCA 776129
Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265
|| | || ||||| || || || || || || ||||| ||||| | | || || ||
Sbjct 776128 CGTCCTCGCCTTCTTCGCAGCCTCCGATGGCATTGTCAACGAGAACCTTGTTGAGCGATT 776069
Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325
| | || || ||| | | ||||| || || |||||||| ||||| || |||||
Sbjct 776068 CTCTAGCGAAGTACAAATCCCCGAGGCACGATGCTTCTACGGTTTCCAAATCATGATGGA 776009
Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA 61385
||| || ||||| |||| ||| | | |||||||| || |||||||| |||| | |
Sbjct 776008 GAACGTTCACTCAGAGACCTACTCTCTGCTCATCGACACATACATCAGCGAGCCCAAGCA 775949
Query 61386 ACGT--GAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGCG 61440
|| | || | ||||| |||||||| | || || | | | || ||| ||
Sbjct 775948 GCGCAGGTACC--TCTTCAACGCCATCGACAACATCCC--CTGC-ATCCGCAAGAAGGCC 775894
Query 61441 GATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499
|| |||||| | |||||| || | | ||| | ||||| | | || | | ||
Sbjct 775893 GACTGGGCCCTGCGATGGATCTCCGACAAGAACTCC-ACATTCGCCAACCGCCTTGTTGC 775835
Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559
||| || | || |||||| | || ||||| || || || ||| | ||||| ||| | ||
Sbjct 775834 ATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAA 775775
Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619
||| || || || ||||||||||| || ||| ||| ||| | || || || ||||||||
Sbjct 775774 GAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGG 775715
Query 61620 CATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCG 61677
|||||| || || | ||| || || ||| | || || | ||| | || |
Sbjct 775714 CATGCACACCGACTTCGCCTGCCTT-CTCTTC--TCTCT-CCTCGAGAACAAGCCCAGCC 775659
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
| ||| ||| | | || | ||| || || || || ||||| || |||
Sbjct 775658 CA-GAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGC 775600
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
||||| | || | | || |||||||||| | || |||| || || || ||
Sbjct 775599 GACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAG 775540
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTA---TGAAGCGGATCTATAATACGAAA 61854
|| || || ||||||||| || | | | || | | || | |||| | | |
Sbjct 775539 TTCGTCGCTGACCGTCTGCTGTTGGCCCTCGGCAACGTCAA---GGTCTACCACGCCACC 775483
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
||||| || || |||||||| | ||||| |||| ||| ||||| || || ||||||||
Sbjct 775482 AACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAG 775423
Query 61915 CGTGTAGGCGACTATCA 61931
|| || |||||||| ||
Sbjct 775422 CGCGTCGGCGACTACCA 775406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567617216560
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