Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq26 102 3e-16 >seq26 Length=492030 Score = 102 bits (112), Expect = 3e-16 Identities = 146/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 364370 ACCCTCTCTCCTCGCAA-GGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAAT 364428 ||||||| | || || ||| || ||||||||| | | ||| || | | |||| Sbjct 250663 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACACTCGATCAAATGGGCAAT 250604 Query 364429 AGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGC 364488 ||||||||||| ||||||| | | ||||||||||| | || || | || || Sbjct 250603 TGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCCTCCCT 250544 Query 364489 GGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGC 364547 || || ||||||||||| || || | | ||| |||||||||||||||||| | | | Sbjct 250543 GGAGAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACCGTGAC 250485 Query 364548 GAGAAGCAAACTTGTCGCCAAT 364569 |||||||||||||||| ||||| Sbjct 250484 GAGAAGCAAACTTGTCACCAAT 250463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884884492141547