Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq430 235 8e-60 >seq430 Length=7832 Score = 235 bits (260), Expect = 8e-60 Identities = 192/229 (84%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||| ||||||| ||| |||||| ||||||||||||| ||| | Sbjct 4684 GTACAAAGGTCAGGGACGTAATCAACGCATGCT-GATGACACGCGCTTACTAGGCATT-C 4741 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||| | ||| |||||||||| | |||||||| ||||| | ||| | |||||| Sbjct 4742 CTCGTTGAAAAGCAATAATTGCAATGCTTTATCCCCAGCACGACAGAGTTTAACAAGATT 4801 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| || ||| ||||| | |||||||| | ||||||||||||||||||| Sbjct 4802 ACCCAATTCTTTCGAACAAGGAAAAGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 4861 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4862 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 4910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996015105