Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq430 437 2e-120 >seq430 Length=7832 Score = 437 bits (484), Expect = 2e-120 Identities = 285/312 (91%), Gaps = 1/312 (0%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||||||||||||| ||||||| || || |||||||||||||||| |||| ||||| Sbjct 5640 GTCCGGCCGGGCCTT-CCTTCTGAAGAACCTCATGCCCTTCACTGGGCGTGCTGGGGAAT 5582 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 5581 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACGTTA 5522 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||||||||||| |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 5521 GCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACGCCGCAA 5462 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 5461 TGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGAT 5402 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 5401 TTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGAAC 5342 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 5341 GAAAGTTAGGGG 5330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194993856