Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq430 437 2e-120
>seq430
Length=7832
Score = 437 bits (484), Expect = 2e-120
Identities = 285/312 (91%), Gaps = 1/312 (0%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
||||||||||||||| ||||||| || || |||||||||||||||| |||| |||||
Sbjct 5640 GTCCGGCCGGGCCTT-CCTTCTGAAGAACCTCATGCCCTTCACTGGGCGTGCTGGGGAAT 5582
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 5581 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACGTTA 5522
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
||||||||||||| |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 5521 GCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACGCCGCAA 5462
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 5461 TGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGAT 5402
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 5401 TTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGAAC 5342
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 5341 GAAAGTTAGGGG 5330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194993856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |