Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq430 493 2e-137
seq345 109 9e-22
>seq430
Length=7832
Score = 493 bits (546), Expect = 2e-137
Identities = 289/297 (97%), Gaps = 3/297 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1040 TACTAAGCGGTATTACCATTGGGGCAA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1098
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1158
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1218
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1219 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1278
Query 241 CAAATTTCGAGGGA--CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|| ||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 CACATTTCGAGGAACTCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1335
>seq345
Length=740673
Score = 109 bits (120), Expect = 9e-22
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
|||||||||||| | ||||||||||||||| | || | | |||||||||||||| ||
Sbjct 677804 CGACATCGAAGGGTTGAAAAGCAACGTCGCTGTTAATACCTCGCTGCCACAAGCCAATTT 677745
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
||||| ||||||||||||||| |||||| | |||| ||| |||
Sbjct 677744 TCCCTATGGTAACTTTTCTGGTACCTCTGGTCTCACATTCCGA 677702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854395326432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |