Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq430 170 2e-40
>seq430
Length=7832
Score = 170 bits (188), Expect = 2e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 5468 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 5527
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 5528 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 5587
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 5588 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 5646
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 5647 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 5684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196845998
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |