Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq430 170 2e-40 >seq430 Length=7832 Score = 170 bits (188), Expect = 2e-40 Identities = 173/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 5468 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 5527 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 5528 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 5587 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 5588 CAGCACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 5646 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 5647 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 5684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196845998