Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq430 444 1e-122
>seq430
Length=7832
Score = 444 bits (492), Expect = 1e-122
Identities = 284/309 (92%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct 4993 GAGCGAGACCTTACTCTGCTAAATAGCCAGGCTAACTTTGGTTGGTCGCCGGCTTCTTAG 4934
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4933 AGAGACTATCAACTCAAGTTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4874
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 4873 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTTTCCTTGTTCG 4814
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 4813 AAAGAATTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAAAGCATTGCAATTATTG 4754
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 4753 CTTTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCATGCGTTGATTACGTCCCTG 4694
Query 320 CCCTTTGTA 328
||||||||
Sbjct 4693 ACCTTTGTA 4685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194818816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |