Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20consortialis_20[genbank_20GCA_5F001950455.1_202016-12- 09] 23 sequences; 34,240,857 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq20 717 0.0 >seq20 Length=7796 Score = 717 bits (794), Expect = 0.0 Identities = 565/665 (85%), Gaps = 15/665 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| || Sbjct 2565 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 2624 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2625 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2684 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||| ||| |||||| |||||| || |||||||||||||||||||||||||||| Sbjct 2685 TGAAAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 2744 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| ||| | | ||| || || ||| |||||||||| | | | Sbjct 2745 GTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCACTTCGCCGTGT 2803 Query 262 TCAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 ||||||||||||||| |||| |||| ||| |||||| |||||| ||||| || || | Sbjct 2804 TCAGGCCAGCATCAGTTCGGCGCGG-GGGAAAAAGGCTTCGGGAACGTGGCTCC--TCCG 2860 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCT 379 || ||||||||||||| | ||| | || || ||||||||||| |||||| | || Sbjct 2861 GGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGCTGGACTGAGGACCGCGCATCTGCA 2918 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||| | Sbjct 2919 AGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 2977 Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 2978 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 3037 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 3038 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 3093 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 3094 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 3153 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || || Sbjct 3154 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 3213 Query 679 GGCGA 683 ||||| Sbjct 3214 GGCGA 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999506650