Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2506 159 1e-36 seq2473 132 2e-28 seq2720 82.4 3e-13 >seq2506 Length=522835 Score = 159 bits (176), Expect = 1e-36 Identities = 133/163 (82%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 296 GCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCC 355 ||| | ||||||| | ||| ||| || |||| ||| | || | ||||||||| ||| Sbjct 989 GCCTCTGGAATGTATCGTCCTCCGGTACGTCTTATGGCCAGAGGCGCAATGCGGCCAGCC 1048 Query 356 TGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTT 415 ||||||||| |||| | |||| |||||||||| |||||| ||||||||||||||||| Sbjct 1049 GGGACTGAGGATCGCGTTTCGGCACGGATGCTGGCATAATGGCTGTAAGCGGCCCGTCTT 1108 Query 416 GGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG 458 ||||||||||||||||||| ||||||| | ||||||||| ||| Sbjct 1109 GGAACACGGACCAAGGAGTGTAACATCCACGCGAGTGTTCGGG 1151 >seq2473 Length=337605 Score = 132 bits (146), Expect = 2e-28 Identities = 84/91 (92%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 || |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 34171 TGCGAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 34230 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACC 113 ||| ||||||||||||||||||| |||||| Sbjct 34231 TTCATCTAAAGCTAAATATTGGCTGGAGACC 34261 >seq2720 Length=634548 Score = 82.4 bits (90), Expect = 3e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 || || |||| |||||| ||||||||||||||||| ||| ||| |||||| |||| ||| Sbjct 204625 CCATGCGAAGTTCCTTCAACGAGTCGAGTTGTTTGAGAACGCAACTCTAAGTGGGTAGTA 204566 Query 80 AATTTCTTCTAAA 92 |||||| |||||| Sbjct 204565 AATTTCATCTAAA 204553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079934041250