Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq91 152 1e-34 seq786 91.5 4e-16 >seq91 Length=719 Score = 152 bits (168), Expect = 1e-34 Identities = 214/301 (71%), Gaps = 27/301 (9%) Strand=Plus/Plus Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCC 189 |||| ||||||||||||||||||| ||||||| || ||||||| || || | Sbjct 1 TTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTT-------GCACTCCTC 53 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT----TCGTG 245 || ||||||||| |||||||||||||||||| ||||||||||| ||| || Sbjct 54 CTC--TTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGAC 111 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCAT 305 || |||||| |||||||||| ||||||||||| | ||||| | | | || | Sbjct 112 TTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGACA 171 Query 306 GAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCC 365 |||||| || ||| | | || | |||||| |||||| ||||| | | Sbjct 172 GAGCTTGCG---------CTTAGC-----CGGGGCCTCCTTCTTCCGAAGGTACGGAGGC 217 Query 366 TTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCA 425 |||||| ||||||||| | ||||||||||||||||||||| ||||||| |||| Sbjct 218 AATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCA 277 Query 426 C 426 | Sbjct 278 C 278 >seq786 Length=3107 Score = 91.5 bits (100), Expect = 4e-16 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||||| | | |||||||| |||||| Sbjct 1273 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGTT 1214 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 | | ||||| |||||| | | | ||| | | |||||||||||||||||||||| Sbjct 1213 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGG 1161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260761230400