Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1715 199 1e-48 seq786 84.2 7e-14 >seq1715 Length=795 Score = 199 bits (220), Expect = 1e-48 Identities = 290/406 (71%), Gaps = 3/406 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||||||||||| || ||| ||| || ||||| | || | | || | Sbjct 405 TCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCTAACAGCCGGTTTC 346 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 ||||| | ||||| ||| | | ||||||||||||| ||| ||||| | ||||||||| Sbjct 345 CAACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCA 287 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||| ||| | ||||| || | | | || | |||||||| ||| Sbjct 286 GTCAAACTACCCGCCACAGAGGGTCCCTGTTCCGGCTTACGGAACGAGGTTAGACATCAG 227 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | ||| ||||||||||| | | | ||||||| | || ||| || ||| || Sbjct 226 AAAACAACAGGGTGGTATTTCACCTATGGCTCCACATCGGCTGGCGCCAATGCTTCAAAG 167 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||| ||||||| | || ||||||| | ||||| ||| ||||| | Sbjct 166 CCTCCCACCTATGCTACACAGTTCTTTCCTAATGCCACTCTGAAGCTGCAGTAAAGGTGC 107 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| ||||| | | ||||||| || | | ||||||| | Sbjct 106 ACGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCT 47 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCA 404 | || ||| | ||||||| ||| ||||||||||||||||||||| Sbjct 46 GAGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCA 1 >seq786 Length=3107 Score = 84.2 bits (92), Expect = 7e-14 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 330 AGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGT 389 |||||||| ||| || | ||||||||| | ||| | | |||||||| | | |||| Sbjct 1274 AGCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGT 1215 Query 390 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 443 || | ||||| |||||| | | | ||| | | |||||||||||||||||||||| Sbjct 1214 TAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGG 1161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702347651200