Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq1433 156 1e-33 seq2095 89.7 1e-13 >seq1433 Length=2545 Score = 156 bits (172), Expect = 1e-33 Identities = 361/540 (67%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || || |||||||| ||||||||| |||| | || ||| || | | Sbjct 1299 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 1358 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 ||||| || ||||| ||||| || || || | || | |||||||| | || ||| Sbjct 1359 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 1418 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | | ||| | || | | | ||| ||| |||||||| || Sbjct 1419 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 1478 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| || |||||| ||| ||||||| || || ||| | ||||||| ||| |||||| Sbjct 1479 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCGC 1538 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAG-AT 38007 ||| | | | ||||| ||||||||||||||| | || ||||| || Sbjct 1539 AGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGT-GAAGACCAT 1597 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 ||| |||||| | || ||||| | | || ||||| ||||| || || || | Sbjct 1598 CAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCC 1657 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 ||||| |||| |||| || || ||| ||| |||||||| ||||| ||||| Sbjct 1658 GAAGATGGCGCTGGCGCCCTGCCA---CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAA 1714 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | |||| ||| | | | |||||| | || | || | || ||||||| ||||| Sbjct 1715 GCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 1774 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||||||||| | ||||| ||| | || || || |||||| ||| ||||| || Sbjct 1775 CGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGA 1834 >seq2095 Length=1157 Score = 89.7 bits (98), Expect = 1e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 38077 GCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTC-ATGCA 38135 |||| |||||||||||| | || ||| ||||||||| ||||||||| |||| |||| Sbjct 988 GCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTGTCGCTGCA 1047 Query 38136 TGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACG 38195 | | |||||||| | || | || | || ||||||| |||||||| ||||| | Sbjct 1048 ACT-CTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATG 1106 Query 38196 CGCTGTTGACGCATATGGTAGCCCAACAATGCG 38228 ||||| | || || ||| | || || ||||||| Sbjct 1107 CGCTGCTCACCCACATGCTGGCGCAGCAATGCG 1139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130635229598750