Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2550 201 9e-47 seq2473 156 3e-33 >seq2550 Length=338734 Score = 201 bits (222), Expect = 9e-47 Identities = 446/663 (67%), Gaps = 6/663 (1%) Strand=Plus/Plus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | || | ||||||||| | || || || || ||| || | ||| || || Sbjct 314599 GGACAGAACAAGGTCCAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTC 314658 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || || ||||||||| || |||| || || | ||||| || ||||| | Sbjct 314659 CAAAGAGCAAGGAAGAGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGA 314718 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || || || |||||||| |||| |||||| ||||| |||||||| ||||| | ||| Sbjct 314719 TCCAGAAATTCAAAGATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGC 314778 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 |||||| ||||||||| || ||||| |||||| |||||| |||||||| | ||| ||| Sbjct 314779 CGTTTGTTGCCACCTTGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGT 314838 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 | | || ||||| |||||| ||||| | || ||| || || || ||| Sbjct 314839 ATAATTCCATTAGAAGAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGA 314898 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTG 66656 || || || |||||||||||||| || ||||| || || |||||| || | | | Sbjct 314899 TGGACGTTAAGACCAATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTA 314958 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 || | | |||||||| ||| || |||| || | || | || ||| | || Sbjct 314959 TC--GTAAATGCCGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTT 315016 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 | || | ||| || | || ||| |||||||||| ||| || || || | | | | Sbjct 315017 GTGGCTGGGGCGTTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGG 315076 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836 |||| |||| || ||||| ||| | ||||| | || |||||||| || | |||| Sbjct 315077 ACATCAAATTATAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAA 315136 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAG 66895 ||||| | | || ||| || || || | || | || || || | | ||| || Sbjct 315137 CACGCATAATCATGTGTTGCGGGCGCTC-AGCAACTTTGCCGTTAATTCGGAGTAAATAT 315195 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATG 66955 || | || || ||||||| ||||| ||| ||| || ||||| | ||| ||| ||| Sbjct 315196 GACCTCTCTAGTGTCTTGAATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATG 315255 Query 66956 GCC 66958 ||| Sbjct 315256 GCC 315258 Score = 100 bits (110), Expect = 2e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| || ||||||||||| |||||||| || || | || || || | ||| ||||||| Sbjct 314246 TGGGCAGCGCAAGAGATGCTAGGTTGCAAACCGCAACTTCATCTGGCGAGGTGTACTCGA 314305 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 ||||| ||||||| || || || || || || | || | || || || |||| Sbjct 314306 TGATTTCCGTGCACAAGTTGGAGCTACGAATCGTTCCGAGGTTTTTCTGGTTGCTTTTGC 314365 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 | |||||||| |||||||| | |||| | ||| | |||||||| Sbjct 314366 GGTTGCATGCGTCCTTGTAGAGCATGAAGGGATTTCCGGTCTC 314408 >seq2473 Length=337605 Score = 156 bits (172), Expect = 3e-33 Identities = 214/295 (73%), Gaps = 7/295 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| ||||||||||| || ||||| ||||||||||| | || || |||||||| Sbjct 139697 ATTTGGCAAATGTACAAAAAAGCCGAAGCATCCTTCTGGACTGCTGAAGAAATCGATTTG 139756 Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| | |||||||| | | | | | ||| || ||||| | ||||| Sbjct 139757 TCCAAAGATCTCCATGACTGGAACCATCGACTGAACGA-CGATGAACGCTACTTCATCTC 139815 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | || |||| ||||| ||||| || || || ||||||||||||||| | | || | Sbjct 139816 TCGCGTCCTGGCCTTCTTCGCCGCCTCCGATGGCATCGTCAATGAGAATCTTGTCGAGAG 139875 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| || || || | | ||||| ||||| || ||||| |||||||| | Sbjct 139876 ATTCAGCGC-TGAAGTTCAGATTCCAGAGGCTCGTTGCTTTTACGGATTCCAGATCATGA 139934 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| |||| || |||| ||| | | ||||| || |||||||||| ||| Sbjct 139935 TGGAGAATATCCATTCCGAGACATACTCTCTCCTCATTGACACGTACATCAAGGA 139989 Score = 87.8 bits (96), Expect = 1e-12 Identities = 293/450 (65%), Gaps = 17/450 (4%) Strand=Plus/Plus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 || ||| | || ||||| | |||||||| | || ||||| || || || || | || Sbjct 140165 CGCTTGATTGCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCTTCGCTTCCATT 140224 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| | ||||| || || |||||||| ||||| ||||| || || ||||| || Sbjct 140225 TTCTGGCTAAAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACGAATTGATCTCT 140284 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT----CAAACGCTATCTGGT 61664 || || ||||| | || ||| ||||| |||| || || | || ||| Sbjct 140285 CGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTGCTGTTTTCTCACATGC-ATC---- 140339 Query 61665 GAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAA 61722 |||| || ||| | ||| | | ||| | ||||| || || || Sbjct 140340 --ATCGGCCCAGTCCCCAGGCCGTT--GAAGCCATTATCACAGAGGCAGTTGAAATTGAG 140395 Query 61723 CAGGAATTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAAT 61781 ||||||| |||| || || | ||| | | | || | || ||||| | || || Sbjct 140396 AAGGAATTCTTGACCGATGCCCT-CCCTTGTGCTCTGCTTGGAATGAACTCCAAGCTCAT 140454 Query 61782 GTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGAT 61841 || || || || || || ||||||||||| || | || | | | || | || | | Sbjct 140455 GTGTCAATACATCGAGTTCGTTGCCGACCGGTTGCTTGTGGCTCTTGGCAACAAAAAGTT 140514 Query 61842 CTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAA 61901 ||||||| | | |||||||| || || ||||||| || ||||||| ||| ||||| || Sbjct 140515 CTATAATGCCACTAACCCATTCGACTTTATGGACAATATCTCGCTGGCTGGTAAGACCAA 140574 Query 61902 TTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || ||||| ||||| || || || || Sbjct 140575 CTTCTTTGAGAAGCGTGTTGGTGATTACCA 140604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553100518000