Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq1401 134 4e-27 >seq1401 Length=3381 Score = 134 bits (148), Expect = 4e-27 Identities = 286/425 (67%), Gaps = 4/425 (1%) Strand=Plus/Minus Query 2516 ACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGA 2575 |||| ||||| ||||||| ||||| || || |||| |||| |||||||||||| |||| Sbjct 961 ACAAGTACCCGATCATCAGCATCGAGGACGGCATGGCCGAAGGCGACTGGGACGGCTGGA 902 Query 2576 AATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAA 2635 | || || || || || || | || || || |||| || |||||| | ||||| | Sbjct 901 AGCTGCTGACCGAGCGCCTGGGCAGCAAGGTGCAGCTGGTGGGCGACGACCTGTTCGTCA 842 Query 2636 CTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCA 2695 | ||||| ||| | |||| || | | | | || ||||| ||||| |||| Sbjct 841 CCAACACCAAGATCCTCAAGGAAGGCATCGACAAGCGCATCGCCAACTCGATCCTGATCA 782 Query 2696 AAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAG 2755 | | ||||| ||||| || |||| || || || | ||| ||||| ||||| || | Sbjct 781 AGATCAACCAGATCGGCACGCTGACCGAGACCTTCGCCGCCATCGAGATGGCCAAGCGCG 722 Query 2756 CTGGATACACAGCAGTAGTATCA--CACCGTTCAGGTGAAACTGAAGATTCAACAATCGC 2813 | ||||| || || |||| ||||| || || || || || || || ||||| Sbjct 721 CCAACTACACGGCCGT--CATCAGCCACCGCTCGGGCGAGACCGAGGACAGCACCATCGC 664 Query 2814 TGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 || || || || | || ||||| || || || ||||| || || | || | || Sbjct 663 CGACATCGCGGTGGGCACCAACGCCGGCCAGATCAAGACCGGCTCGCTCAGCCGCAGCGA 604 Query 2874 CCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGA 2933 ||| || || || |||||||| |||| || ||||| || | || || || || || | Sbjct 603 CCGCATGGCCAAGTACAACCAGCTGCTGCGCATCGAGGAAGACCTGGGCGACGTCGCGCA 544 Query 2934 ATACC 2938 |||| Sbjct 543 GTACC 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156032702160300