Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq1433 125 1e-23 seq2095 98.7 2e-15 >seq1433 Length=2545 Score = 125 bits (138), Expect = 1e-23 Identities = 182/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 196112 CACGACAAAG-CTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGC 196169 |||| | ||| | ||||| ||||| || ||||| | | | | ||||| ||||||| Sbjct 1286 CACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGT-TCGGCTACCAGATGC 1344 Query 196170 GCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCA 196229 | ||||| ||| | || || ||||||||||| ||||| ||||| |||| ||| |||| Sbjct 1345 GGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCA 1404 Query 196230 TCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACA 196289 |||| || || |||||||||||||| | || | | ||| ||| | ||| || Sbjct 1405 TCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGC 1464 Query 196290 ACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACG 196349 ||| || | |||||| |||| |||||| ||| ||| ||||||||||||| |||| Sbjct 1465 GCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACG 1524 Query 196350 GTAAGCAGTGGCG 196362 | ||||||||| Sbjct 1525 GCGTGCAGTGGCG 1537 >seq2095 Length=1157 Score = 98.7 bits (108), Expect = 2e-15 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182 ||||| |||||||| ||||| | | | | ||||| |||||||| ||||||||| Sbjct 517 GACCGCACCGGCACGGGCACGCTCAGCGTCT-TCGGCCACCAGATGCGGTTCGATCTGGC 575 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 || || |||||| || ||||||| |||||||| || ||||| || ||||| || | Sbjct 576 CGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTT 635 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAAC 196270 |||||||||||| ||| ||||||||| Sbjct 636 GCTGTGGTTCCTGCGCGGCGACACCAAC 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771512743839000