Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq322 181 2e-43
seq1348 150 3e-34
seq732 73.4 8e-11
>seq322
Length=1727
Score = 181 bits (200), Expect = 2e-43
Identities = 245/336 (73%), Gaps = 14/336 (4%)
Strand=Plus/Minus
Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63
||||| ||||| |||||| || |||||| | | |||||||||| || |||| |
Sbjct 1469 CCCGATGAGGGGAGTGAAACAGTACCTGAAACGGATTGCCTACAAGCAGTTGGAGG---G 1413
Query 64 TGATTCGG---TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120
| || | |||| |||| ||| |||||||||| | || || ||| | || | |||
Sbjct 1412 TCCTTGAGGCCTGACAGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTTTCAAGC 1354
Query 121 GAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG- 178
|| ||||| | || || ||| || || ||||||||| || || ||||||||
Sbjct 1353 AAGCTTAAG-----CCGGTAGGTGTAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGACAT 1299
Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238
|||| | | ||||| ||||||| | |||||| || || |||| ||||| |||||
Sbjct 1298 AGTTTGAAGTATTAGACCCGAAACCCGGCGATCTAGGCATGACCAGGATGAAGGTGCGGT 1239
Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298
||| || |||||| |||||||| | |||||||||||||| ||||||| | | | ||
Sbjct 1238 AACACGCACTGGAGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGTTTA 1179
Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||||||||||| | ||||||||||| ||
Sbjct 1178 GGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 1143
>seq1348
Length=33369
Score = 150 bits (166), Expect = 3e-34
Identities = 229/324 (71%), Gaps = 9/324 (3%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| || |||||| | |
Sbjct 12320 AGGGGAGTGAAATAGATCCTGAAACCGCATGCTTACAAAAAGTAGGAGCCC---GCAAGG 12376
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| ||| || |||||||
Sbjct 12377 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 12435
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| | || ||||||| ||| | |||
Sbjct 12436 GAATAGGGA-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGATCAGTCGCTGGGTG 12490
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | |||| ||||| || ||||| || |||
Sbjct 12491 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGG 12550
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| |||||||| | |||| ||| | ||||||| | || ||||||||||||||
Sbjct 12551 AGGTCCGAACCGACTAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGC 12610
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|| |||||| |||||||||| ||
Sbjct 12611 TAAACAAACTTGGAAATAGCTGGT 12634
>seq732
Length=604
Score = 73.4 bits (80), Expect = 8e-11
Identities = 80/106 (75%), Gaps = 9/106 (8%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT--T 68
|| || ||||||||| |||||| ||| | |||||||||| || ||||| | ||| |
Sbjct 416 AGCGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAAGCCGTGGGAGCGTCGGGATCTT 475
Query 69 CGG-------TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTT 107
||| |||| |||||||||||| | ||||||||| ||||||
Sbjct 476 CGGATCCTCGTGACTGCGTGCCTTTTGAAGAATGAGCCTGCGAGTT 521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972766136832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |