Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq322 181 2e-43 seq1348 150 3e-34 seq732 73.4 8e-11 >seq322 Length=1727 Score = 181 bits (200), Expect = 2e-43 Identities = 245/336 (73%), Gaps = 14/336 (4%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| | | |||||||||| || |||| | Sbjct 1469 CCCGATGAGGGGAGTGAAACAGTACCTGAAACGGATTGCCTACAAGCAGTTGGAGG---G 1413 Query 64 TGATTCGG---TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120 | || | |||| |||| ||| |||||||||| | || || ||| | || | ||| Sbjct 1412 TCCTTGAGGCCTGACAGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTTTCAAGC 1354 Query 121 GAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG- 178 || ||||| | || || ||| || || ||||||||| || || |||||||| Sbjct 1353 AAGCTTAAG-----CCGGTAGGTGTAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGACAT 1299 Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238 |||| | | ||||| ||||||| | |||||| || || |||| ||||| ||||| Sbjct 1298 AGTTTGAAGTATTAGACCCGAAACCCGGCGATCTAGGCATGACCAGGATGAAGGTGCGGT 1239 Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298 ||| || |||||| |||||||| | |||||||||||||| ||||||| | | | || Sbjct 1238 AACACGCACTGGAGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGTTTA 1179 Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||| | ||||||||||| || Sbjct 1178 GGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 1143 >seq1348 Length=33369 Score = 150 bits (166), Expect = 3e-34 Identities = 229/324 (71%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| || |||||| | | Sbjct 12320 AGGGGAGTGAAATAGATCCTGAAACCGCATGCTTACAAAAAGTAGGAGCCC---GCAAGG 12376 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || ||||||| Sbjct 12377 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 12435 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| | || ||||||| ||| | ||| Sbjct 12436 GAATAGGGA-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGATCAGTCGCTGGGTG 12490 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | |||| ||||| || ||||| || ||| Sbjct 12491 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGG 12550 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||| ||| | ||||||| | || |||||||||||||| Sbjct 12551 AGGTCCGAACCGACTAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGC 12610 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||||| |||||||||| || Sbjct 12611 TAAACAAACTTGGAAATAGCTGGT 12634 >seq732 Length=604 Score = 73.4 bits (80), Expect = 8e-11 Identities = 80/106 (75%), Gaps = 9/106 (8%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT--T 68 || || ||||||||| |||||| ||| | |||||||||| || ||||| | ||| | Sbjct 416 AGCGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAAGCCGTGGGAGCGTCGGGATCTT 475 Query 69 CGG-------TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTT 107 ||| |||| |||||||||||| | ||||||||| |||||| Sbjct 476 CGGATCCTCGTGACTGCGTGCCTTTTGAAGAATGAGCCTGCGAGTT 521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972766136832