Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2451 250 4e-64 >seq2451 Length=1386 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 393 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 336 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 335 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 276 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||| | ||||| || ||||||||||||||||||| Sbjct 275 ACCCAGACCTCTCGGCCAAGGTGTTGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 216 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751974640915