Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1348 78.8 1e-12 >seq1348 Length=33369 Score = 78.8 bits (86), Expect = 1e-12 Identities = 126/179 (70%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||| ||||||| || |||| ||||||| | | ||| Sbjct 13406 CTGAAGCTTAGTGGCTTTTCCTGGAAGCTGGGTATCACTCACTTCGGCGGC---AAGCCG 13350 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACC 124 ||||| |||| |||| ||| || |||||||||||| | | | |||| | | Sbjct 13349 CCTCGTTATCA-CTCCTCACCTAAGCCCGGCGGATTTACCTACCAGGCACGGCTACAAGC 13291 Query 125 TTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATTA 183 || ||| ||||| ||||| || || | || ||||||||||||| ||||||| || Sbjct 13290 TTGAACCGGGACATCCAACACCCGGCCGAGTTAACCTTCTCCGTCCCCACATCGCACTA 13232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518382518418