Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 104 2e-20
>seq1348
Length=33369
Score = 104 bits (114), Expect = 2e-20
Identities = 136/183 (74%), Gaps = 14/183 (8%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| ||||
Sbjct 11856 GGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 11915
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-------GATAT 119
|| ||||| ||| | |||||||| |||| ||||||||||| ||||| | |
Sbjct 11916 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACCCTTAGGGGT 11975
Query 120 ATTGGA-GAT-ATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177
|| | | ||| | ||||| | | ||| |||||||| || |||||||||||||| |
Sbjct 11976 ATCGCATGATGAATTCATA--GTCATGCG--AGGCGAACCGGGTGAACTGAAACATCTCA 12031
Query 178 GTA 180
|||
Sbjct 12032 GTA 12034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476783921261
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |