Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1348 104 2e-20 >seq1348 Length=33369 Score = 104 bits (114), Expect = 2e-20 Identities = 136/183 (74%), Gaps = 14/183 (8%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| |||| Sbjct 11856 GGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 11915 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-------GATAT 119 || ||||| ||| | |||||||| |||| ||||||||||| ||||| | | Sbjct 11916 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACCCTTAGGGGT 11975 Query 120 ATTGGA-GAT-ATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 || | | ||| | ||||| | | ||| |||||||| || |||||||||||||| | Sbjct 11976 ATCGCATGATGAATTCATA--GTCATGCG--AGGCGAACCGGGTGAACTGAAACATCTCA 12031 Query 178 GTA 180 ||| Sbjct 12032 GTA 12034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476783921261