Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq322 149 9e-34
seq1348 136 5e-30
>seq322
Length=1727
Score = 149 bits (164), Expect = 9e-34
Identities = 186/251 (74%), Gaps = 13/251 (5%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57
|||| ||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| |
Sbjct 211 CTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTTAG 270
Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117
|| | ||||||||||| |||||||||||| ||| || || ||| || || |||
Sbjct 271 CAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC--CCCCCGACAG- 327
Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
| | | || ||| | ||| | |||||| |||||| ||||| | || ||||||
Sbjct 328 --AGCTTGCGCTT----AGCCGGGGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 380
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
|| |||||| | ||| ||| | | | |||||| |||| |||||||||||||||||||||
Sbjct 381 GAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 440
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 441 GGTTTCGGGTA 451
>seq1348
Length=33369
Score = 136 bits (150), Expect = 5e-30
Identities = 185/254 (73%), Gaps = 7/254 (3%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| |||||| |||||||||||||||| || ||||| || |||| | || || |||
Sbjct 13672 CTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAG 13614
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| ||||||||||| || | ||| | ||| ||| | ||||
Sbjct 13613 AGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCTCATTGGGCTCC 13554
Query 121 A--CACGTCG---TTCACCAGC-AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174
| | || | |||||| | | ||||| |||||| |||||||||||| | || |||
Sbjct 13553 ATCCGCGAGGGACTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTT 13494
Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234
||||| |||||| || ||||| | | | |||||||| || ||| | | |||| ||
Sbjct 13493 GCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCGCACCAGT 13434
Query 235 GTCGGTTTACGGTA 248
|||||||| |||||
Sbjct 13433 GTCGGTTTGCGGTA 13420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694376583313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |