Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq322 149 9e-34 seq1348 136 5e-30 >seq322 Length=1727 Score = 149 bits (164), Expect = 9e-34 Identities = 186/251 (74%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57 |||| ||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| | Sbjct 211 CTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTTAG 270 Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117 || | ||||||||||| |||||||||||| ||| || || ||| || || ||| Sbjct 271 CAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC--CCCCCGACAG- 327 Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 | | | || ||| | ||| | |||||| |||||| ||||| | || |||||| Sbjct 328 --AGCTTGCGCTT----AGCCGGGGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 380 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 || |||||| | ||| ||| | | | |||||| |||| ||||||||||||||||||||| Sbjct 381 GAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 440 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 441 GGTTTCGGGTA 451 >seq1348 Length=33369 Score = 136 bits (150), Expect = 5e-30 Identities = 185/254 (73%), Gaps = 7/254 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 13672 CTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAG 13614 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| || | ||| | ||| ||| | |||| Sbjct 13613 AGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCTCATTGGGCTCC 13554 Query 121 A--CACGTCG---TTCACCAGC-AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 | | || | |||||| | | ||||| |||||| |||||||||||| | || ||| Sbjct 13553 ATCCGCGAGGGACTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTT 13494 Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234 ||||| |||||| || ||||| | | | |||||||| || ||| | | |||| || Sbjct 13493 GCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCGCACCAGT 13434 Query 235 GTCGGTTTACGGTA 248 |||||||| ||||| Sbjct 13433 GTCGGTTTGCGGTA 13420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694376583313