Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1348 152 5e-35 seq322 84.2 2e-14 >seq1348 Length=33369 Score = 152 bits (168), Expect = 5e-35 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13584 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 13643 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 13644 TGACGCCTGCCCGGTGCTGGAAGATTAAGTGATG 13677 >seq322 Length=1727 Score = 84.2 bits (92), Expect = 2e-14 Identities = 72/89 (81%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA----AAGTGGACGTATAGGGT 123 ||||||||||| |||||||||| |||||| || || ||| ||||||||||| Sbjct 300 GCGACTGTTTAGCAAAAACACAGGGCTCTGCTAAGTCGGCTTCAAGACGACGTATAGGGC 241 Query 124 GTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||||||| ||||||||| Sbjct 240 CTGACGCCTGCCCGGTGCCTGAAGGTTAA 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476783921261