Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1348 435 8e-120 seq322 300 4e-79 >seq1348 Length=33369 Score = 435 bits (482), Expect = 8e-120 Identities = 351/420 (84%), Gaps = 17/420 (4%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| |||||||||||| |||||||| Sbjct 13856 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 13797 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13796 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 13737 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||||||||||||||| || Sbjct 13736 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCGATCAAGAGCTT-GC---- 13682 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 13681 ----ACCCCATCACTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 13626 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||||||||||||||||||||||| |||||||||||||| || | | | | ||| Sbjct 13625 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACC 13566 Query 301 GGCATGAGCT---TACG-GAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAG 355 || ||| | || ||| | ||||||| | | ||| |||||||| |||||| Sbjct 13565 TCATTGGGCTCCATCCGCGAG---GGACTTCACCTACTAAAGGCACACCTTCTTCCGAAG 13509 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||||| | |||||| ||||||||| |||||||||||||||||||||| | || ||| Sbjct 13508 TTACGGTGTCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 13449 >seq322 Length=1727 Score = 300 bits (332), Expect = 4e-79 Identities = 324/430 (75%), Gaps = 27/430 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||||||| | || ||||||||| ||||| | ||||||||| Sbjct 27 CGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGT 86 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 146 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||| ||||||| || ||||||| || Sbjct 147 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTT-GC---- 201 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || || | ||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct 202 ----ACTCCTCCTCTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 257 Query 241 ----TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296 || || |||||| |||||||||| ||||||||||| | ||||| | | | Sbjct 258 GAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC 317 Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 || | |||||| || ||| | | || | |||||| |||||| Sbjct 318 CCCCCGACAGAGCTTGCG---------CTTAGC-----CGGGGCCTCCTTCTTCCGAAGG 363 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||||| | | |||||| ||||||||| | ||||||||||||||||||||| |||| Sbjct 364 TACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCT 423 Query 417 ACCCAACCAC 426 ||| ||||| Sbjct 424 ACCTGACCAC 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260756111552