Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 435 8e-120
seq322 300 4e-79
>seq1348
Length=33369
Score = 435 bits (482), Expect = 8e-120
Identities = 351/420 (84%), Gaps = 17/420 (4%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| | | |||||| ||||| ||||||| ||| |||||||||||| ||||||||
Sbjct 13856 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 13797
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13796 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 13737
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||
Sbjct 13736 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCGATCAAGAGCTT-GC---- 13682
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 13681 ----ACCCCATCACTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 13626
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
||||||||||||||||||||||||||| |||||||||||||| || | | | | |||
Sbjct 13625 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACC 13566
Query 301 GGCATGAGCT---TACG-GAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAG 355
|| ||| | || ||| | ||||||| | | ||| |||||||| ||||||
Sbjct 13565 TCATTGGGCTCCATCCGCGAG---GGACTTCACCTACTAAAGGCACACCTTCTTCCGAAG 13509
Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||||||| | |||||| ||||||||| |||||||||||||||||||||| | || |||
Sbjct 13508 TTACGGTGTCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 13449
>seq322
Length=1727
Score = 300 bits (332), Expect = 4e-79
Identities = 324/430 (75%), Gaps = 27/430 (6%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||| | |||||||||| | || ||||||||| ||||| | |||||||||
Sbjct 27 CGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGT 86
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 146
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| ||||||||||||||||||| ||||||| || ||||||| ||
Sbjct 147 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTT-GC---- 201
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
|| || | ||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct 202 ----ACTCCTCCTCTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 257
Query 241 ----TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296
|| || |||||| |||||||||| ||||||||||| | ||||| | | |
Sbjct 258 GAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC 317
Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356
|| | |||||| || ||| | | || | |||||| ||||||
Sbjct 318 CCCCCGACAGAGCTTGCG---------CTTAGC-----CGGGGCCTCCTTCTTCCGAAGG 363
Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416
||||| | | |||||| ||||||||| | ||||||||||||||||||||| ||||
Sbjct 364 TACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCT 423
Query 417 ACCCAACCAC 426
||| |||||
Sbjct 424 ACCTGACCAC 433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260756111552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |