Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2638 331 2e-88
seq2636 104 4e-20
seq2896 102 1e-19
seq1348 75.2 2e-11
>seq2638
Length=1863
Score = 331 bits (366), Expect = 2e-88
Identities = 195/203 (96%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1636 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1695
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1755
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1815
Query 181 GAACGCTTGGCTGCCACAAGCCA 203
|||||||||||||||||||||||
Sbjct 1816 GAACGCTTGGCTGCCACAAGCCA 1838
>seq2636
Length=163785
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 95441 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAACCAACGTCGCTATGAACGCTTGGCTG 95500
>seq2896
Length=46663
Score = 102 bits (112), Expect = 1e-19
Identities = 58/59 (98%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 42083 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCAACATCGAAGGA 42025
>seq1348
Length=33369
Score = 75.2 bits (82), Expect = 2e-11
Identities = 126/181 (70%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| || |||||||| |||| | |||||||||||||||| || ||| || |||||
Sbjct 14417 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 14358
Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
| || ||| |||| | | || | | |||| || ||||||||||||| | ||
Sbjct 14357 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 14301
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223
|| | | ||||| ||||||| ||||| | | |||| |||||||| ||| ||||
Sbjct 14300 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTT 14241
Query 224 T 224
|
Sbjct 14240 T 14240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854370258336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |