Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq322 143 3e-32
seq1348 114 1e-23
>seq322
Length=1727
Score = 143 bits (158), Expect = 3e-32
Identities = 120/151 (79%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | |||||||| || |||||||||| || | | ||||||| |||
Sbjct 8 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 67
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||| | ||||||| ||| ||||||||||||||||||||||||||
Sbjct 68 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 127
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 128 GACAAGGAATTTCGCTACCTTAGGACCGTTA 158
>seq1348
Length=33369
Score = 114 bits (126), Expect = 1e-23
Identities = 115/151 (76%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| |||| |||||| | ||||| |||| | | | ||| ||| ||||
Sbjct 13874 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 13815
Query 84 GCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || ||| | |||||| ||| ||||||||||||||||||||||||||
Sbjct 13814 G-TCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 13756
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 13755 GACAAGGAATTTCGCTACCTTAGGACCGTTA 13725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547181547219
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |