Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq322 143 3e-32 seq1348 114 1e-23 >seq322 Length=1727 Score = 143 bits (158), Expect = 3e-32 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||| ||| Sbjct 8 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 67 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| | ||||||| ||| |||||||||||||||||||||||||| Sbjct 68 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 127 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 128 GACAAGGAATTTCGCTACCTTAGGACCGTTA 158 >seq1348 Length=33369 Score = 114 bits (126), Expect = 1e-23 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||| | ||||| |||| | | | ||| ||| |||| Sbjct 13874 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 13815 Query 84 GCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || ||| | |||||| ||| |||||||||||||||||||||||||| Sbjct 13814 G-TCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 13756 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 13755 GACAAGGAATTTCGCTACCTTAGGACCGTTA 13725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547181547219