Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1179 114 2e-23 seq2422 95.1 2e-17 seq1158 87.8 3e-15 >seq1179 Length=10284 Score = 114 bits (126), Expect = 2e-23 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || || || ||||| ||||||||||| || || || |||||||||||||| ||||||| | Sbjct 1227 GGGGCCTCCTCCAGCACCTTCTGGTGGCGGCGCTGGAGCGAGCAATCGCGCTCGCCCAAG 1168 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 |||||||| | ||| | ||||||| | || || | ||| | ||| || || ||| Sbjct 1167 TGGATGGCATTGCCGTTGCCGTCGCCGAACACCTGGAATTCGATGTGGCGCGGATTGCCG 1108 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAAC 222 ||||| ||||||| |||||| | | || ||||||| Sbjct 1107 AGGTATTTTTCCATGTAGACGGTGGCGTCGCCGAAC 1072 >seq2422 Length=3359 Score = 95.1 bits (104), Expect = 2e-17 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 |||||| || ||||| || || | ||||||||||| || || |||| |||||| ||||| Sbjct 1924 GCCCGGCGCGGGCGCCTCCTCGATCACCTTCTGGTGGCGCCGCTGCATCGAGCAGTCGCG 1865 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 |||||||||| || ||||| || || ||||| ||| | || | ||| | ||| || Sbjct 1864 CTCGCCCAGGTAGACGGCGTTGCGATGCTTGTCGGCCAGGATCTGGATTTCGATGTGCCG 1805 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTC 236 ||||| ||| | || |||| ||| ||| || ||| ||| ||| || || || Sbjct 1804 CGGGTTCTGGAGGAATTTCTCCATGTACACCGCGGGATTGTTGAAGGCGGCTCCGGCCTC 1745 Query 237 GG 238 || Sbjct 1744 GG 1743 >seq1158 Length=12875 Score = 87.8 bits (96), Expect = 3e-15 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 50 CGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGC 109 |||||| ||||| ||||| ||||| || | ||||||||||| || || || ||||| | Sbjct 11582 CGTCCATTCCCGGCGCCGGGGCTTCCTCGATCACCTTCTGGTGGCGGCGCTGAAGCGAAC 11523 Query 110 AATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCA 169 | || || ||| |||||||| | ||| ||| |||| |||| | || |||||||| | Sbjct 11522 AGTCACGTTCGAACAGGTGGACGACGTTGCCGTGGCTGTCGCCGAACACCTGCACTTCGA 11463 Query 170 CGTGACGTGGGTTGGTCAGGTACTTTTC 197 ||| || || | | ||||||||| Sbjct 11462 TGTGGCGCGGCGAGAGGATGTACTTTTC 11435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735975180470