Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 405 1e-110
seq322 289 7e-76
seq732 149 2e-33
>seq1348
Length=33369
Score = 405 bits (448), Expect = 1e-110
Identities = 347/415 (84%), Gaps = 14/415 (3%)
Strand=Plus/Minus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| |||||| |||| |||| |||||||||||| ||||||||
Sbjct 12600 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTACC 12543
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| ||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| |
Sbjct 12542 T-GTTACGGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 12488
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||||||| ||||||| | |||||| ||| | ||||| || ||||||||||||||
Sbjct 12487 CCAGCGACTGATCGCCCTATTCGGACTCGATTT-CTCTACGGCTTCCCTATTCGGTTAAC 12429
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 12428 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTT--- 12373
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
| ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 12372 -GCGGGCTCCTACTTTTTGTAAGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 12315
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct 12314 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCGATTACGAGTATTTAG 12255
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
|||||||||||||||||||||| |||||||| |||| |||| ||| ||||||
Sbjct 12254 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 12200
>seq322
Length=1727
Score = 289 bits (320), Expect = 7e-76
Identities = 325/416 (78%), Gaps = 18/416 (4%)
Strand=Plus/Plus
Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69
|||| |||| ||| |||||||| ||||| || ||||||||| |||||||| || ||||
Sbjct 1183 CACAACTCAT-CCGGTAACTTTT-CAACGTTAATCGGTTCGGACCTCCAGTGCGT-GTTA 1239
Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC-CAGC 128
|| ||||| || |||| ||| | ||||||||| ||||| |||||||| | | ||
Sbjct 1240 CCGCACCTT-CATCCTGGTCAT-GCCTAGATCGCCGGGTTT-CGGGTCTAATACTTCAA- 1295
Query 129 GACTA-GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186
|||| | ||||||| | ||||||||||| |||| ||||| | |||| | ||||||||
Sbjct 1296 -ACTATGTCGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTACCGGCTTAAGCTT 1353
Query 187 TGCCACTGAAAA--TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244
|| ||||| |||||| | |||||||||| ||| |||||||| |||| | |||
Sbjct 1354 -GCT--TGAAACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAG 1410
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||| |||||||||| ||| | |||||||| || ||||||||||||| ||||
Sbjct 1411 GACC-CTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGG 1469
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||||||||||||||||| |||||||||| | |||||||||
Sbjct 1470 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCTATCGGTCATGTACGAGTATTTAGG 1529
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||||| |||||||||||| |||||||| || | |||| ||| ||||||||
Sbjct 1530 CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCG 1585
>seq732
Length=604
Score = 149 bits (164), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 10/227 (4%)
Strand=Plus/Minus
Query 200 AAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC-------CCAACAAAGTGG-GCT 251
|| |||| | | |||| | ||||||| |||||||||| | || | | |||
Sbjct 521 AACTCGCAGGCTCATTCTTCAAAAGGCACGCAGTCACGAGGATCCGAAGATCCCGACGCT 462
Query 252 CCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTT 311
||||| ||||||| ||| ||||||||||| |||||||||||| ||| ||| ||| ||||
Sbjct 461 CCCACGGCTTGTAGGCACACGGTTTCAGGTACTATTTCACTCCGCTC-CCGCGGTACTTT 403
Query 312 TCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAG 371
|| || |||||||||||||||| | | |||||||||| | | ||||||| ||| | |
Sbjct 402 TCACCATTCCCTCACGGTACTA-TCCGCTATCGGTCACCAGGGAATATTTAGGCTTAGCG 344
Query 372 GATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
| ||||||| ||| ||||| || ||||||| || |||| |||||
Sbjct 343 GGTGGTCCCGCCAGATTCACACGGGATTTCTCGGGCCCCGTGCTACT 297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241556779904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |