Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq2775 96.9 3e-18 >seq2775 Length=4861 Score = 96.9 bits (106), Expect = 3e-18 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 39 CAGGTCGGCACTGACAACGTATTGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTA 98 ||||||||| || | || | || |||||||||||||| || |||||||| || | Sbjct 1631 CAGGTCGGCGACGAGGAGGTGATCCTGGGCCTGTCCGGCGGTGTCGACTCCTCCGTCGCG 1572 Query 99 GCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 ||||| ||| | ||| ||||||||||||||| ||||||||||| || ||||| Sbjct 1571 GCGGCGCTGATCCACCGGGCCATCGGCGACCAGCTGACCTGCGTCTTCGTCGA 1519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383987050680