Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq680 77.0 6e-12 >seq680 Length=3625 Score = 77.0 bits (84), Expect = 6e-12 Identities = 162/242 (67%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 3 AGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTG 62 |||||||| || | || || |||| ||| ||| | || ||| | || || | Sbjct 1736 AGCTGGATTACGTCCTCGAGATCGACGTCCCGTTCGACGCCATCGTCGAACGCATGAGCG 1795 Query 63 GCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGG 122 |||| ||| || | ||||| |||||| |||||| | ||| ||||| |||| Sbjct 1796 GCCGCCGCTCGCACGTGGCCTCCGGCCGCACCTACCACGTGAAGTTCAACCCGCCGAAGG 1855 Query 123 TTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAG 182 | || |||| ||||| ||||||||||| ||||||||||| | |||||| |||| Sbjct 1856 TCGCCGGCATCGACGACGTGACCGGCGAGCCGCTGGTACAGCGTGACGACGACCGTGAAG 1915 Query 183 AAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCT 242 |||| || | ||||| || || | |||| || |||||| ||||||| || Sbjct 1916 AAACGGTCATGAAGCGCCTCGAGGTGTATGAGGCGCAGACGCGGCCGCTCGTGGACTACT 1975 Query 243 AC 244 || Sbjct 1976 AC 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899168698848