Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq1658 260 3e-67 >seq1658 Length=15788 Score = 260 bits (288), Expect = 3e-67 Identities = 301/400 (75%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||| |||| || |||||||||| |||||||||||| || |||||| ||||| | Sbjct 9924 CGATGGTGAGCAGGTCCCCGCCCACCTCGGTCCACGCCAGCCCGACGACCTGGCCGACCT 9983 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | |||||||||||| |||||||| |||| ||||||||||||||||| | | ||| Sbjct 9984 GGTTCTGCTGCTCGGCGCGGCCGTAGGTGAACTTGCGCACGCCGAGGAATTCATTGAGGT 10043 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGC--GTTTTTCCAGCGCA--TGTTCCTTGACCGCC 176 ||||| |||||| ||||| || || || ||| | | | | |||||||| || Sbjct 10044 TCTCGGCGGTGACCGTCACC-AGCGGCTTGTACTTCTTGAGGAGCAGCCCCTTGACCACC 10102 Query 177 TTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAG 236 |||||||||||||| | | | |||||| || || || |||||||||||||||||| Sbjct 10103 TTGCGGCAGATCTTGCCCAGGTCGCGCTCGAGAGAGCGGACGCCGGCTTCGCGGGTGTAG 10162 Query 237 TAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCA 296 ||||||| ||||||||| | || | | | | ||| | ||||| ||| Sbjct 10163 TAGCGGATGATGTCGCGCACCGCATCCTCGGTGACCAGCAGCTCCGTGTCCTTCACGCCG 10222 Query 297 TTG--GCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTT 354 ||| ||| |||||||||||| |||||||| | |||||||||| |||||||||| | Sbjct 10223 TTGTTGCC--CATCTGCTTGGGCAACAGGTACTTCAGGGCGATGTTGGTCTTCTCGTCCT 10280 Query 355 CGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 ||||||| || | ||||| |||||||||||||||||||| Sbjct 10281 CGGTGTAGCCGGAGAGGCGGATCACTTCCATCCGGTCCAG 10320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158359676096