Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq1658 260 3e-67
>seq1658
Length=15788
Score = 260 bits (288), Expect = 3e-67
Identities = 301/400 (75%), Gaps = 9/400 (2%)
Strand=Plus/Plus
Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60
||||||| |||| || |||||||||| |||||||||||| || |||||| ||||| |
Sbjct 9924 CGATGGTGAGCAGGTCCCCGCCCACCTCGGTCCACGCCAGCCCGACGACCTGGCCGACCT 9983
Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120
| | |||||||||||| |||||||| |||| ||||||||||||||||| | | |||
Sbjct 9984 GGTTCTGCTGCTCGGCGCGGCCGTAGGTGAACTTGCGCACGCCGAGGAATTCATTGAGGT 10043
Query 121 AGTCGGCCGTGACCTTCACCGAGAAGC--GTTTTTCCAGCGCA--TGTTCCTTGACCGCC 176
||||| |||||| ||||| || || || ||| | | | | |||||||| ||
Sbjct 10044 TCTCGGCGGTGACCGTCACC-AGCGGCTTGTACTTCTTGAGGAGCAGCCCCTTGACCACC 10102
Query 177 TTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAG 236
|||||||||||||| | | | |||||| || || || ||||||||||||||||||
Sbjct 10103 TTGCGGCAGATCTTGCCCAGGTCGCGCTCGAGAGAGCGGACGCCGGCTTCGCGGGTGTAG 10162
Query 237 TAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCA 296
||||||| ||||||||| | || | | | | ||| | ||||| |||
Sbjct 10163 TAGCGGATGATGTCGCGCACCGCATCCTCGGTGACCAGCAGCTCCGTGTCCTTCACGCCG 10222
Query 297 TTG--GCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTT 354
||| ||| |||||||||||| |||||||| | |||||||||| |||||||||| |
Sbjct 10223 TTGTTGCC--CATCTGCTTGGGCAACAGGTACTTCAGGGCGATGTTGGTCTTCTCGTCCT 10280
Query 355 CGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394
||||||| || | ||||| ||||||||||||||||||||
Sbjct 10281 CGGTGTAGCCGGAGAGGCGGATCACTTCCATCCGGTCCAG 10320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158359676096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |