Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq322 203 8e-50
seq1348 167 5e-39
>seq322
Length=1727
Score = 203 bits (224), Expect = 8e-50
Identities = 294/412 (71%), Gaps = 21/412 (5%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||| || |||| |||| |||||| ||| ||||||| | || || | | | |
Sbjct 574 CGACTACCCCCTTCGGGCTCGTCTTAGGGGCCGGCTCACCCTGCGCGGATTAGCCTTGCG 633
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
| ||||||||||| |||||| | ||| || ||||| | | ||||||||||| ||
Sbjct 634 CAGGAACCCTTGGTCTTTCGGCGAAAGGGCATCTCACCCTTTTTATCGCTACTCATGTCT 693
Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACG 178
|||||| |||| | | ||||||||| || | ||| | ||||| | || ||
Sbjct 694 GCATTCGCACTTCCGATACCTCCACCACCCATT-ACCAGATGGCTTCGCAGGCTTACGGA 752
Query 179 ACGCTCCCCTACCC---------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229
||||||| ||||| ||| ||||| || |||||||| | | |||
Sbjct 753 ACGCTCCGCTACCGCGTGTAGTAAACTACACAC----CCTAAGCTTCGGTGCACGTCTTG 808
Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACCAGTGAGCTATTACGCACTC 284
||||||| ||||| ||| ||| | | | |||| ||||||||||| |||||| ||
Sbjct 809 AGCCCCGTTACATCTTCGCCGCAGGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTC 868
Query 285 TTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTT 344
||| ||||||||||||||| ||||||||||||||||||| | | | |||||| ||||
Sbjct 869 TTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTT 928
Query 345 CCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396
|||||| || | |||| ||| ||||||||| | || |||||||||||||
Sbjct 929 CCCACTTAGACGTGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCT 980
>seq1348
Length=33369
Score = 167 bits (184), Expect = 5e-39
Identities = 289/407 (71%), Gaps = 20/407 (5%)
Strand=Plus/Minus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| ||||||||| | || || ||| | | |
Sbjct 13194 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACTCTACGCCGATGAACGTTGCGTAG 13135
Query 64 GAACCCTTG-GATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGC 121
|| ||||| | | | ||||| |||| || |||||| | |||||||||||||| ||
Sbjct 13134 AAAACCTTGCGCTTA-CGGCGAGCGGGCTTTTCACCCGCTTTAACGCTACTCATGCCAGC 13076
Query 122 ATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGA 179
|||| |||| | || | ||||| || | || | | || |||||| || ||| |
Sbjct 13075 ATTCGCACTTCTGAT-ACCTCCAGCATCCC-TCTCGAGACACCTTCACAGGCTTACAGAA 13018
Query 180 CGCTCCCCTACC-CAACCACACAGGTTG----CCACAGCTTCGGCGGATAACT---TAAG 231
||||| |||||| | ||| || || ||||||||| ||||| | ||
Sbjct 13017 CGCTCTCCTACCACTTGCACTTGCGTGCAAATCCGCAGCTTCGG----TAACTGGCTTAG 12962
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| ||||| || |||| | | ||| || |||||||||||||||| ||||| ||
Sbjct 12961 CCCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAT 12902
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
|||||||||||| |||||||| ||||| ||| | || |||| || |||||||||
Sbjct 12901 GATGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTT 12842
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|| || |||||| ||||||||| | |||||| |||||||||||
Sbjct 12841 AGCCA-ATTTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 12796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177559007744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |