Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1348 233 3e-59 >seq1348 Length=33369 Score = 233 bits (258), Expect = 3e-59 Identities = 210/261 (80%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| | | || |||| |||| Sbjct 14568 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGCACATAGCTACTCGGCAATGCCACTGGCG 14509 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG-CTCC 134 ||||| | | |||||||||| ||||| ||||||||||||||||| | ||| || | Sbjct 14508 TGACAACCGATACACCAGAGGTGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGGCTTC 14449 Query 135 TCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACC 194 | |||||| | | |||||||| |||||||||| ||||||||| ||||||| | |||| Sbjct 14448 T-TCAAATCTGCAGCGCCCACGGAAGATAGGGACCAAACTGTCTCACGACGTTTTAAACC 14390 Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254 |||||| ||| ||||||||| ||||||||||| |||||||||||| || |||||||| Sbjct 14389 CAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCA 14330 Query 255 GGATGAGACGAGCCGACATCG 275 |||||||| |||||||||||| Sbjct 14329 GGATGAGATGAGCCGACATCG 14309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780773669716