Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 233 3e-59
>seq1348
Length=33369
Score = 233 bits (258), Expect = 3e-59
Identities = 210/261 (80%), Gaps = 2/261 (1%)
Strand=Plus/Minus
Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75
|||||||||| |||||| ||||| ||||| || ||||| | | || |||| ||||
Sbjct 14568 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGCACATAGCTACTCGGCAATGCCACTGGCG 14509
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG-CTCC 134
||||| | | |||||||||| ||||| ||||||||||||||||| | ||| || |
Sbjct 14508 TGACAACCGATACACCAGAGGTGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGGCTTC 14449
Query 135 TCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACC 194
| |||||| | | |||||||| |||||||||| ||||||||| ||||||| | ||||
Sbjct 14448 T-TCAAATCTGCAGCGCCCACGGAAGATAGGGACCAAACTGTCTCACGACGTTTTAAACC 14390
Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254
|||||| ||| ||||||||| ||||||||||| |||||||||||| || ||||||||
Sbjct 14389 CAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCA 14330
Query 255 GGATGAGACGAGCCGACATCG 275
|||||||| ||||||||||||
Sbjct 14329 GGATGAGATGAGCCGACATCG 14309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780773669716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |