Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002002.1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 111 2e-22
>seq3129
Length=4947
Score = 111 bits (122), Expect = 2e-22
Identities = 125/159 (79%), Gaps = 9/159 (6%)
Strand=Plus/Minus
Query 1 TGCTGACCAACATCGCCCGCC-TGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGAC 59
|||||||||||| |||| | | || |||||||| |||||| || |||||| | || ||
Sbjct 3207 TGCTGACCAACA-CGCCGGGCGTGCTGGACAAGACCGGCAAGCTGCTGACCGACCTC-AC 3150
Query 60 --CACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCG 117
| ||| | | | ||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct 3149 GGCCCGCGAGA--TCGACGAGCTGTTCGCCGACGGCACCATCTCCGGCGGCATGCTGCCC 3092
Query 118 AAGATCCGTTGCGCACTGGAAGCAGTGCAAG-GCGGCGT 155
|||||| | |||| ||||| || | |||| |||||||
Sbjct 3091 AAGATCAGCGGCGCGCTGGATGCCG-CCAAGAGCGGCGT 3054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534381978863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |