Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq1238 140 5e-31
seq530 80.6 4e-13
>seq1238
Length=24191
Score = 140 bits (154), Expect = 5e-31
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 85 ACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCAT 143
||||| || | ||| ||||| || || | | || | ||| || ||| | |||||||
Sbjct 2554 ACCTGCAGGATCGCCAGGAATGCCTCCT-GCGGGACTTCGACAGAGCCGATCTGCTTCAT 2496
Query 144 GCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCC 203
| ||| || || ||||| |||||||| || ||||||||||| ||| | | ||| |||||
Sbjct 2495 TCTTTTCTTGCCTGCCTTCTGCTTCTCGAGGAGCTTGCGCTTGCGGGTGATGTCTCCGCC 2436
Query 204 GTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTG 263
||||||||| ||||| |||||||| | || |||||||| | || || ||||| |
Sbjct 2435 GTAGCATTTTGCCAGCACGTTCTTGCGCAGCGCCTTGACCGTCTCGCGGGCGATGATGTT 2376
Query 264 CCCGCCAATGGCGGCCTGGATCGCGACGTCG 294
| |||| |||||||||||||| || ||||||
Sbjct 2375 CGCGCCGATGGCGGCCTGGATGGCCACGTCG 2345
>seq530
Length=37815
Score = 80.6 bits (88), Expect = 4e-13
Identities = 107/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200
|||||| || || || |||| |||||||| |||||||||||||| || | |||| ||
Sbjct 33892 CATGCGCTTCTTGCCTTCCTTCTGCTTCTCCAGCAGCTTGCGCTTGCGCGTCGCGTCGCC 33833
Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260
||| |||||||| || |||| ||| | || ||| || | ||||| || |
Sbjct 33832 GCCATAGCATTTCGCGGTCACGTCCTTGCGCAGCGCCGCGATCGTCTCGCGCGCGATCAC 33773
Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGA 289
|| ||||| || || |||||||||| ||
Sbjct 33772 CTTGCCGCCGATCGCCGCCTGGATCGGGA 33744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838370815296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |