Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1238 140 5e-31 seq530 80.6 4e-13 >seq1238 Length=24191 Score = 140 bits (154), Expect = 5e-31 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 85 ACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCAT 143 ||||| || | ||| ||||| || || | | || | ||| || ||| | ||||||| Sbjct 2554 ACCTGCAGGATCGCCAGGAATGCCTCCT-GCGGGACTTCGACAGAGCCGATCTGCTTCAT 2496 Query 144 GCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCC 203 | ||| || || ||||| |||||||| || ||||||||||| ||| | | ||| ||||| Sbjct 2495 TCTTTTCTTGCCTGCCTTCTGCTTCTCGAGGAGCTTGCGCTTGCGGGTGATGTCTCCGCC 2436 Query 204 GTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTG 263 ||||||||| ||||| |||||||| | || |||||||| | || || ||||| | Sbjct 2435 GTAGCATTTTGCCAGCACGTTCTTGCGCAGCGCCTTGACCGTCTCGCGGGCGATGATGTT 2376 Query 264 CCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 | |||| |||||||||||||| || |||||| Sbjct 2375 CGCGCCGATGGCGGCCTGGATGGCCACGTCG 2345 >seq530 Length=37815 Score = 80.6 bits (88), Expect = 4e-13 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 |||||| || || || |||| |||||||| |||||||||||||| || | |||| || Sbjct 33892 CATGCGCTTCTTGCCTTCCTTCTGCTTCTCCAGCAGCTTGCGCTTGCGCGTCGCGTCGCC 33833 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260 ||| |||||||| || |||| ||| | || ||| || | ||||| || | Sbjct 33832 GCCATAGCATTTCGCGGTCACGTCCTTGCGCAGCGCCGCGATCGTCTCGCGCGCGATCAC 33773 Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || ||||| || || |||||||||| || Sbjct 33772 CTTGCCGCCGATCGCCGCCTGGATCGGGA 33744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838370815296