Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq44 129 1e-27
>seq44
Length=600
Score = 129 bits (142), Expect = 1e-27
Identities = 203/289 (70%), Gaps = 35/289 (12%)
Strand=Plus/Minus
Query 128 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACT 187
|| |||||||||||||||||||| |||||||||||| |||| || ||||| | ||||||
Sbjct 600 TGATCATCCTCTCAGACCAGCTAAGGATCGTCGCCTTGGTGCGCTCTTACCACACCAACT 541
Query 188 AGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCT 247
||||||||| | ||| |||||| | | ||| || ||||||| ||
Sbjct 540 AGCTAATCCTACGCGGGCTCATCC--TCG-----GGCGATAA-------ATCTTTGGACT 495
Query 248 T-GCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGT 306
| || | | || |||||||||| | |||| | ||||| || || |||||
Sbjct 494 TAACGTCATCATCCGGTATTAGCAGTCATTTCTAACTGTTATTCCGAACCCAAGGGCAGA 435
Query 307 TTCCCAGACATTACTCACCCGTCCGCCACTCG-TCAGCGAAGCAGCAAGCTGCTTCCTGT 365
|||||| | |||| ||||||| ||||||| | || ||||| | ||
Sbjct 434 TTCCCACGCGTTACGCACCCGTGCGCCACTAGATC--CGAAG-----ATCT--------- 391
Query 366 TACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 390 ---CGTTCGACTTGCATGTGTTAGGCATGCCGCCAGCGTTCGTTCTGAG 345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222357448256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |