Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq44 129 1e-27 >seq44 Length=600 Score = 129 bits (142), Expect = 1e-27 Identities = 203/289 (70%), Gaps = 35/289 (12%) Strand=Plus/Minus Query 128 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACT 187 || |||||||||||||||||||| |||||||||||| |||| || ||||| | |||||| Sbjct 600 TGATCATCCTCTCAGACCAGCTAAGGATCGTCGCCTTGGTGCGCTCTTACCACACCAACT 541 Query 188 AGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCT 247 ||||||||| | ||| |||||| | | ||| || ||||||| || Sbjct 540 AGCTAATCCTACGCGGGCTCATCC--TCG-----GGCGATAA-------ATCTTTGGACT 495 Query 248 T-GCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGT 306 | || | | || |||||||||| | |||| | ||||| || || ||||| Sbjct 494 TAACGTCATCATCCGGTATTAGCAGTCATTTCTAACTGTTATTCCGAACCCAAGGGCAGA 435 Query 307 TTCCCAGACATTACTCACCCGTCCGCCACTCG-TCAGCGAAGCAGCAAGCTGCTTCCTGT 365 |||||| | |||| ||||||| ||||||| | || ||||| | || Sbjct 434 TTCCCACGCGTTACGCACCCGTGCGCCACTAGATC--CGAAG-----ATCT--------- 391 Query 366 TACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 390 ---CGTTCGACTTGCATGTGTTAGGCATGCCGCCAGCGTTCGTTCTGAG 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222357448256