Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1348 513 5e-143 seq322 309 1e-81 >seq1348 Length=33369 Score = 513 bits (568), Expect = 5e-143 Identities = 421/501 (84%), Gaps = 17/501 (3%) Strand=Plus/Plus Query 1 TCGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 12458 TCGAGTCCGAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 12517 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||||||||||||| |||||| | ||||||||||||||| |||| ||||| |||| Sbjct 12518 TGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGACTAGTGTTGCAAAA 12577 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 12578 CTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 12637 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | Sbjct 12638 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCTGCGGGGGTAGAGCACTGTTTAG 12697 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT-GCGCATCAGTTTTA 298 ||||||||||||| ||||||||||||||| |||||||||||||| |||| || || Sbjct 12698 GCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAATACCGCA-GAG---TA 12753 Query 299 CCGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | || ||||| || ||| ||||||||| ||||| | | ||||| || || || || Sbjct 12754 CAGCTTGGGAGACAGAGCACCGGGTGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGA 12813 Query 356 CTATCAGCTAAGGCCCCGAAA--TGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413 | ||||||||| ||| ||| || ||||||| | |||||||| || ||||| Sbjct 12814 CCGCCAGCTAAGGTCCCTAAAATTG---GCTAAGTGGGA--AACGAAGTGGGAAGGCTAA 12868 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||| ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| Sbjct 12869 AACAGTCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACT 12927 Query 474 AGTCGAGGAGTCGGGCGTGGA 494 ||||| ||| ||| ||| Sbjct 12928 GATCGAGTCGTCCTGCGCGGA 12948 >seq322 Length=1727 Score = 309 bits (342), Expect = 1e-81 Identities = 366/483 (76%), Gaps = 16/483 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTA---GACCCGAAACCAAGTGATCTACCC 58 |||||| ||| ||||||||| | | | | ||| ||||||||||| | |||||| | Sbjct 1319 CGAGTCTGAATAGGGCGACA-TAGTTTGAAGTATTAGACCCGAAACCCGGCGATCTAGGC 1261 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| ||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| Sbjct 1260 ATGACCAGGATGAAGGTGCGGTAACACGCACTGGAGGTCCGAACCGATTAACGTTGAAAA 1201 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 ||| ||||||| |||| |||||||||||||| || ||| | ||||||||||||||| Sbjct 1200 GTTACCGGATGAGTTGTGTTTAGGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGTTC 1141 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTT 236 || ||||||||||| |||||||||||| | | | |||| | ||||||||||||||| Sbjct 1140 TCCGCGAAAACTATTGAGGTAGTGCCTCGGATGGA-CACCCTAGGGGGTAGAGCACTG-G 1083 Query 237 ATGGCT-AGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 |||| | ||||||| | || |||||| | |||||||||||| | | ||| Sbjct 1082 ATGGATGCGGGGGTC-GCGAGATCTACCAACTCTAACCAAACTCCGAATACCTAGGAGTG 1024 Query 296 TTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGG 354 || ||| | || || ||| |||||||||||||||| | | ||| || | || | Sbjct 1023 ATATCCGGGAGACAGACGGC--GGGTGCTAAGGTCCGTCGTCAAAAGGGAAACAGCCCTG 966 Query 355 ACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414 || ||||||||| ||| || | || |||||| | || | || || | | || Sbjct 965 ACCTACAGCTAAGGTCCCCAAGTCACGTCTAAGTGGGA--AAGCATGTGGGAATCCCAAA 908 Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474 ||| | |||| |||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct 907 ACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACAGCTCACTG 849 Query 475 GTC 477 ||| Sbjct 848 GTC 846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689541185024