Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 302 8e-80
seq96 96.9 6e-18
seq732 91.5 3e-16
>seq1348
Length=33369
Score = 302 bits (334), Expect = 8e-80
Identities = 259/319 (81%), Gaps = 1/319 (0%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||
Sbjct 11847 AGAGCATGTGGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATA 11906
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| |
Sbjct 11907 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCA-C 11965
Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180
|||| ||| || ||||| ||||| ||||| |||| | |||||| || ||||||||||
Sbjct 11966 CCTTAGGGGTATCGCATGATGAATTCATAGTCATGCGAGGCGAACCGGGTGAACTGAAAC 12025
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240
|||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 12026 ATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAAT 12085
Query 241 GGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCAT 300
||| |||||| | ||||| | || || |||| |||||| |||||
Sbjct 12086 CGGAAGAGCCTGCTAGTGATAGCACGACTGTTAACGGAACGGCTTGGAAAGGCCGGCCAT 12145
Query 301 AGCGGGTGATAGCCCCGTA 319
|||||||||||||||||||
Sbjct 12146 AGCGGGTGATAGCCCCGTA 12164
>seq96
Length=944
Score = 96.9 bits (106), Expect = 6e-18
Identities = 88/110 (80%), Gaps = 7/110 (6%)
Strand=Plus/Plus
Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68
|||||||||||||| ||||||||||||||||||| | | |||||||||| |||
Sbjct 837 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 896
Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117
|| |||||||| |||||| ||| |||||||||||||||||||||
Sbjct 897 AGGTGTGAGCAA----CCTTTGACCCGACGATTTCCGAATGGGGAAACCC 942
>seq732
Length=604
Score = 91.5 bits (100), Expect = 3e-16
Identities = 84/105 (80%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 145 ACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGA 203
||||||| | || || ||||| || ||| |||||||||| |||| | |||||| |||
Sbjct 3 ACATAGGCAGTGTGGAGGGAACGAGGGGAAGTGAAACATCTCAGTACCCTCAGGAAGAGA 62
Query 204 AATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
|| |||||| |||||| ||||||||||||||||| |||||||
Sbjct 63 AAACAACCGTGATTCCGGGAGTAGTGGCGAGCGAAACCGGATGAG 107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918368030496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |