Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1348 302 8e-80 seq96 96.9 6e-18 seq732 91.5 3e-16 >seq1348 Length=33369 Score = 302 bits (334), Expect = 8e-80 Identities = 259/319 (81%), Gaps = 1/319 (0%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 11847 AGAGCATGTGGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATA 11906 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| | Sbjct 11907 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCA-C 11965 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 |||| ||| || ||||| ||||| ||||| |||| | |||||| || |||||||||| Sbjct 11966 CCTTAGGGGTATCGCATGATGAATTCATAGTCATGCGAGGCGAACCGGGTGAACTGAAAC 12025 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 12026 ATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAAT 12085 Query 241 GGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCAT 300 ||| |||||| | ||||| | || || |||| |||||| ||||| Sbjct 12086 CGGAAGAGCCTGCTAGTGATAGCACGACTGTTAACGGAACGGCTTGGAAAGGCCGGCCAT 12145 Query 301 AGCGGGTGATAGCCCCGTA 319 ||||||||||||||||||| Sbjct 12146 AGCGGGTGATAGCCCCGTA 12164 >seq96 Length=944 Score = 96.9 bits (106), Expect = 6e-18 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Plus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68 |||||||||||||| ||||||||||||||||||| | | |||||||||| ||| Sbjct 837 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 896 Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || |||||||| |||||| ||| ||||||||||||||||||||| Sbjct 897 AGGTGTGAGCAA----CCTTTGACCCGACGATTTCCGAATGGGGAAACCC 942 >seq732 Length=604 Score = 91.5 bits (100), Expect = 3e-16 Identities = 84/105 (80%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 145 ACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGA 203 ||||||| | || || ||||| || ||| |||||||||| |||| | |||||| ||| Sbjct 3 ACATAGGCAGTGTGGAGGGAACGAGGGGAAGTGAAACATCTCAGTACCCTCAGGAAGAGA 62 Query 204 AATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 || |||||| |||||| ||||||||||||||||| ||||||| Sbjct 63 AAACAACCGTGATTCCGGGAGTAGTGGCGAGCGAAACCGGATGAG 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918368030496