Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 327 4e-87
seq322 197 5e-48
>seq1348
Length=33369
Score = 327 bits (362), Expect = 4e-87
Identities = 414/565 (73%), Gaps = 23/565 (4%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| ||||||||||| |||| | ||| ||| || |||| | | ||| ||
Sbjct 14174 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTCC 14115
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
||| || | ||||| | | |||||||||| ||||||||| | |||||||||
Sbjct 14114 GACCGTAACTAGCGTACCTTCGAACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCCAG 14056
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179
| ||||| || |||| |||||||||||| ||| ||| | ||||| |||||||| || |
Sbjct 14055 TCAAACTGCCTACCATGCACTGTCCCCAGCCCGGATAACGGGCCTAGGTTAGAACCTCAA 13996
Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239
|| ||| ||||||||||||| | |||||||| |||||| | || ||| ||
Sbjct 13995 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCACAAGATCTAGCGACCCTGCTTCAAAG 13937
Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
||||||||||||||||||| | | | || ||||||| |||||| ||| ||||| |
Sbjct 13936 CCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATACAAAGCTACAGTAAAGGTTC 13877
Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
||||||||| |||| | ||||| | | ||||| | || | | ||| ||| |
Sbjct 13876 ATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCT 13817
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418
| | || || ||||||| || |||||||||||||||||||||||||||||||||
Sbjct 13816 GAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 13757
Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct 13756 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTT 13697
Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538
| || | | || ||| ||| ||| ||||| |||||||||||
Sbjct 13696 CGATCAAGAG-CTTGCACCCCA----------TCA--------CTTAATCTTCCAGCACC 13656
Query 539 GGGCAGGCGTCAGTCCGTATACCTC 563
|||||||||||| || ||||| ||
Sbjct 13655 GGGCAGGCGTCACACCCTATACGTC 13631
>seq322
Length=1727
Score = 197 bits (218), Expect = 5e-48
Identities = 201/265 (76%), Gaps = 19/265 (7%)
Strand=Plus/Plus
Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359
|||||||||| |||| ||||| | | ||||||| || | | ||||||| | |
Sbjct 8 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 67
Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419
|| ||| | ||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 68 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 127
Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 128 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTC 187
Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539
|||| || | | | ||| |||||||||||||| ||||||
Sbjct 188 AATT----------CAGAGCTTG---------CACTCCTCCTCTTAACCTTCAGGCACCG 228
Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||| || ||||| |||
Sbjct 229 GGCAGGCGTCAGGCCCTATACGTCG 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702340739456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |