Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1348 327 4e-87 seq322 197 5e-48 >seq1348 Length=33369 Score = 327 bits (362), Expect = 4e-87 Identities = 414/565 (73%), Gaps = 23/565 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||| |||| | ||| ||| || |||| | | ||| || Sbjct 14174 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTCC 14115 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| || | ||||| | | |||||||||| ||||||||| | ||||||||| Sbjct 14114 GACCGTAACTAGCGTACCTTCGAACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCCAG 14056 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179 | ||||| || |||| |||||||||||| ||| ||| | ||||| |||||||| || | Sbjct 14055 TCAAACTGCCTACCATGCACTGTCCCCAGCCCGGATAACGGGCCTAGGTTAGAACCTCAA 13996 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || ||| ||||||||||||| | |||||||| |||||| | || ||| || Sbjct 13995 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCACAAGATCTAGCGACCCTGCTTCAAAG 13937 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| | | | || ||||||| |||||| ||| ||||| | Sbjct 13936 CCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATACAAAGCTACAGTAAAGGTTC 13877 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | Sbjct 13876 ATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCT 13817 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || || ||||||| || ||||||||||||||||||||||||||||||||| Sbjct 13816 GAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 13757 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 13756 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTT 13697 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 | || | | || ||| ||| ||| ||||| ||||||||||| Sbjct 13696 CGATCAAGAG-CTTGCACCCCA----------TCA--------CTTAATCTTCCAGCACC 13656 Query 539 GGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||| || ||||| || Sbjct 13655 GGGCAGGCGTCACACCCTATACGTC 13631 >seq322 Length=1727 Score = 197 bits (218), Expect = 5e-48 Identities = 201/265 (76%), Gaps = 19/265 (7%) Strand=Plus/Plus Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| ||||| | | ||||||| || | | ||||||| | | Sbjct 8 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 67 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || ||| | ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 68 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 127 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 128 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTC 187 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 |||| || | | | ||| |||||||||||||| |||||| Sbjct 188 AATT----------CAGAGCTTG---------CACTCCTCCTCTTAACCTTCAGGCACCG 228 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 229 GGCAGGCGTCAGGCCCTATACGTCG 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702340739456