Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2638 280 2e-73 >seq2638 Length=1863 Score = 280 bits (310), Expect = 2e-73 Identities = 237/284 (83%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 1638 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 1581 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 1580 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1521 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCCGA 178 ||||| || ||| | || |||| | ||||| |||||||||||||| || ||||| || Sbjct 1520 GAACGCGGCGATGTTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTTTGGGCCCTGA 1461 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234 |||| |||||| | || | ||| ||| ||||| | |||||| |||||| ||| Sbjct 1460 ACCTCAGCAGGTCAGCGA-TGGCTTCC--GGGAAGAGACTCTCGGGCGC-CAGCTGACGG 1405 Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||| |||| |||||| ||||| |||||||||| Sbjct 1404 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 1361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819172374784