Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2638 280 2e-73
>seq2638
Length=1863
Score = 280 bits (310), Expect = 2e-73
Identities = 237/284 (83%), Gaps = 12/284 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 1638 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 1581
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1580 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1521
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCCGA 178
||||| || ||| | || |||| | ||||| |||||||||||||| || ||||| ||
Sbjct 1520 GAACGCGGCGATGTTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTTTGGGCCCTGA 1461
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234
|||| |||||| | || | ||| ||| ||||| | |||||| |||||| |||
Sbjct 1460 ACCTCAGCAGGTCAGCGA-TGGCTTCC--GGGAAGAGACTCTCGGGCGC-CAGCTGACGG 1405
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| |||||| |||| |||||| ||||| ||||||||||
Sbjct 1404 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 1361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819172374784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |