Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2747 226 9e-57 seq2162 125 2e-26 >seq2747 Length=1068 Score = 226 bits (250), Expect = 9e-57 Identities = 139/146 (95%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 362 ATTACCACGGTTATCCATGTAGT--AAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1068 ATTACCACGGGTATCCATGTAGTTGAAGGTACTATCAAATAAACGATAACTGATTTAATG 1009 Query 420 AGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| Sbjct 1008 AGCCATTCGCAGTTTCACAGTACAAATTTGCTTATACTTAGACATGCATGGCTTAATCTT 949 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 948 TGAGACAAGCATATGACTACTGGCAG 923 >seq2162 Length=759 Score = 125 bits (138), Expect = 2e-26 Identities = 131/171 (77%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250 ||| |||| |||||||||| |||||||||||||| ||||||| | | ||| ||| Sbjct 171 CTATCATCAAAAGTTGATAAAGCAGAAATTTGAATAAACCATCACTGATACAAAATCATA 112 Query 251 CGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG-GTTTTTTATCT 309 ||| | |||||||||| ||||| ||| |||| | || ||| ||| |||||||| | Sbjct 111 TAATTTGACAAGTTATTATAAATCATCAAAAAGCCTCAAAAGGCATTGATTTTTTTATTT 52 Query 310 AATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||| | ||| ||||| | | |||||||||||||| |||| ||| Sbjct 51 AGTAAATACATCTTTTCTGAAGTTGAGATTTTTAGCATGTATCAGCTTTAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510347422976