Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq3355 230 6e-56 seq372 163 7e-36 >seq3355 Length=30814 Score = 230 bits (254), Expect = 6e-56 Identities = 496/738 (67%), Gaps = 8/738 (1%) Strand=Plus/Minus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || || |||||||| ||||||||| |||| | || ||| || | | Sbjct 9151 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 9092 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 ||||| || ||||| ||||| || || || | || | |||||||| | || ||| Sbjct 9091 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 9032 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | | ||| | || | | | ||| ||| |||||||| || Sbjct 9031 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 8972 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| || |||||| ||| ||||||| || || ||| | ||||||| ||| |||||| Sbjct 8971 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCGC 8912 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAG-AT 38007 ||| | | | ||||| ||||||||||||||| | || ||||| || Sbjct 8911 AGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGT-GAAGACCAT 8853 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 ||| |||||| | || ||||| | | || ||||| ||||| || || || | Sbjct 8852 CAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCC 8793 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 ||||| |||| |||| || || ||| ||| |||||||| ||||| ||||| Sbjct 8792 GAAGATGGCGCTGGCGCCCTGCCA---CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAA 8736 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | |||| ||| | | | |||||| | || | || | || ||||||| ||||| Sbjct 8735 GCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 8676 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||||||||| | ||||| ||| | || || || |||||| ||| ||||| || Sbjct 8675 CGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGA 8616 Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304 |||| | |||||||||||| ||| | |||| || || | || || | | |||| Sbjct 8615 CTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACT 8556 Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364 |||||| | ||| |||| | || || ||| | | || || |||||| |||| Sbjct 8555 GCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTC 8496 Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424 ||||| ||||| ||||| ||||| || || | | |||| | | ||||||||||| Sbjct 8495 GATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGAT 8436 Query 38425 TAAAGCACCGGTGGCGGT 38442 || || || |||||||| Sbjct 8435 CAAGGCGCCCGTGGCGGT 8418 >seq372 Length=11520 Score = 163 bits (180), Expect = 7e-36 Identities = 377/561 (67%), Gaps = 8/561 (1%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || ||| |||||||| || ||||||| |||| | || ||| | | Sbjct 9524 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 9583 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || || ||| | | || || || ||| |||| | ||||| ||||| || || Sbjct 9584 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 9643 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGA--GAATGGCGTGACGA 37886 || ||||| | ||||| || ||||| |||| ||||||| | | || | | | Sbjct 9644 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGG--TCAGCA 9701 Query 37887 TTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGC 37946 | ||||| || |||||||| || || |||||||||||| | || ||| |||||||| Sbjct 9702 TCTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGC 9761 Query 37947 GCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGA 38006 || ||| | || ||||| ||||||||||||| || | || | || | Sbjct 9762 GCGACTGGGTGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACA 9821 Query 38007 TCAA-ACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTG 38065 |||| || || |||| | | ||||| | | | || | ||| ||||| | || | Sbjct 9822 TCAAGACCAACCCCGCCT-CGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTC 9880 Query 38066 GACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGG 38125 ||| ||| |||| |||||||||||| | || ||| ||||||||| ||||||||| Sbjct 9881 CACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGG 9940 Query 38126 TTGTCA-TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 |||| |||| | | |||||||| | || | || | || ||||||| ||||| Sbjct 9941 CTGTCGCTGCAACTCT-ACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACAT 9999 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||| |||||| | || || ||| | || || ||||||| |||| || || Sbjct 10000 CGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGA 10059 Query 38245 ACTCATTTTCACCGGCGGCGA 38265 |||| | ||||||||||| Sbjct 10060 GTTCATCTGGACCGGCGGCGA 10080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130634599750650