Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq2140 134 4e-27 >seq2140 Length=6806 Score = 134 bits (148), Expect = 4e-27 Identities = 286/425 (67%), Gaps = 4/425 (1%) Strand=Plus/Plus Query 2516 ACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGA 2575 |||| ||||| ||||||| ||||| || || |||| |||| |||||||||||| |||| Sbjct 5088 ACAAGTACCCGATCATCAGCATCGAGGACGGCATGGCCGAAGGCGACTGGGACGGCTGGA 5147 Query 2576 AATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAA 2635 | || || || || || || | || || || |||| || |||||| | ||||| | Sbjct 5148 AGCTGCTGACCGAGCGCCTGGGCAGCAAGGTGCAGCTGGTGGGCGACGACCTGTTCGTCA 5207 Query 2636 CTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCA 2695 | ||||| ||| | |||| || | | | | || ||||| ||||| |||| Sbjct 5208 CCAACACCAAGATCCTCAAGGAAGGCATCGACAAGCGCATCGCCAACTCGATCCTGATCA 5267 Query 2696 AAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAG 2755 | | ||||| ||||| || |||| || || || | ||| ||||| ||||| || | Sbjct 5268 AGATCAACCAGATCGGCACGCTGACCGAGACCTTCGCCGCCATCGAGATGGCCAAGCGCG 5327 Query 2756 CTGGATACACAGCAGTAGTATCA--CACCGTTCAGGTGAAACTGAAGATTCAACAATCGC 2813 | ||||| || || |||| ||||| || || || || || || || ||||| Sbjct 5328 CCAACTACACGGCCGT--CATCAGCCACCGCTCGGGCGAGACCGAGGACAGCACCATCGC 5385 Query 2814 TGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 || || || || | || ||||| || || || ||||| || || | || | || Sbjct 5386 CGACATCGCGGTGGGCACCAACGCCGGCCAGATCAAGACCGGCTCGCTCAGCCGCAGCGA 5445 Query 2874 CCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGA 2933 ||| || || || |||||||| |||| || ||||| || | || || || || || | Sbjct 5446 CCGCATGGCCAAGTACAACCAGCTGCTGCGCATCGAGGAAGACCTGGGCGACGTCGCGCA 5505 Query 2934 ATACC 2938 |||| Sbjct 5506 GTACC 5510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156031949860164