Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq549 118 1e-21 seq1348 86.0 9e-12 >seq549 Length=26442 Score = 118 bits (130), Expect = 1e-21 Identities = 388/602 (64%), Gaps = 31/602 (5%) Strand=Plus/Minus Query 162100 AAAGTAGCACTTATTACTGGGATCACAGGGCAAGATGGATCTTACCTAGCTGAACTTCTC 162159 || || || ||| | || || | || || ||||| ||||| || ||||| ||| |||| Sbjct 11517 AAGGTTGCGCTTGTCACCGGTGTTACCGGTCAAGACGGATCATATCTAGCAGAATTTCTG 11458 Query 162160 CTTCAGAAAGGATATACAGTTCACGGTATTATCCGTCGTGCTTCTATGATTAACACCCAC 162219 || | ||||| ||| || ||||| |||| || ||||| || || |||| || || Sbjct 11457 CTGGAAAAAGGCTATGAGGTACACGGCATTAAGCGCCGTGCGTCATTGTTTAATACACAG 11398 Query 162220 AGAATTGACCATATCTTTGAC--------CGCATCA---------CT----CTCCATTAT 162258 | ||||||||||||| ||| |||| || || || |||||| Sbjct 11397 CGTATTGACCATATCTATGAAGATCCTCACGCACCATCGCCAGACCTTCGGCTTCATTAT 11338 Query 162259 GGAGACCTTACCGATGCTTTGAGTAT----CGTATCTATTATTAAAACAGTTCAACCAGA 162314 || || | |||| ||| | | | || ||| || | || || || || Sbjct 11337 GGCGATTTATCCGACTCTTCTAATTTGACCCGCATC----ATGCAGGAGGTACAGCCGGA 11282 Query 162315 TGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATA 162374 || | |||||||| || ||||| |||||||| ||| ||||| ||| ||||| Sbjct 11281 CGAGGTTTATAACCTCGGTGCTCAAAGTCACGTGGCTGTTAGTTTTGAAGCGCCGGAATA 11222 Query 162375 CACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGG 162434 || || | || | | || || | | |||| ||||| | || ||| |||| Sbjct 11221 TACCGCGGATGTTGATGGGCTTGGTACGTTGCGTTTGCTGGAAGCAATTCG-CTTTTTGG 11163 Query 162435 TATGGAATCATACGTAAGAAT-CTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTC 162493 || | | | | | | ||| |||||| ||| || || ||||| || || | Sbjct 11162 GATTGGAGAAGAAGACAAAATTCTACCAGGCGTCGACGTCGGAACTTTACGGATCGGTGC 11103 Query 162494 AGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTA 162553 |||| ||||| ||| || | ||| ||| | ||||| ||||| || |||| || || | Sbjct 11102 AGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGTAGCAA 11043 Query 162554 AACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTA 162613 | ||||| | | ||||| | |||||| | ||| ||||| |||| | || | | Sbjct 11042 AGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGCTTGCA 10983 Query 162614 GCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGA 162673 || || || || |||||||||||| |||| ||||| ||||| ||||| || ||||| | Sbjct 10982 ATGGCATCCTGTTTAATCACGAAAGCCCACGTAGAGGCGAGACATTCGTAACGCGCAAAA 10923 Query 162674 TC 162675 || Sbjct 10922 TC 10921 >seq1348 Length=33369 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142792 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851 ||||| |||||||||| ||| ||||| ||||||||||||||||| ||| |||||||| Sbjct 11474 CGGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAT 11533 Query 142852 TCCGTTATTCTCCACCA 142868 |||| || |||||||| Sbjct 11534 CCCGTCATCCTCCACCA 11550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691429112881560