Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq306 275 2e-71 >seq306 Length=92703 Score = 275 bits (304), Expect = 2e-71 Identities = 231/287 (80%), Gaps = 20/287 (7%) Strand=Plus/Minus Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 ||||||| || |||||| |||||| |||||||||||| ||| ||| ||| |||| | Sbjct 58647 GCTTCATCGAAAAAGTAAGAAAACGTTAAGGGTAGTGGGATTCCACCGGCGGCGAA---G 58591 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| ||||||| | | ||| |||||||| ||| ||||| Sbjct 58590 CTCCCACCTATCCTACACCCCCTATGTCCTTTCACAATGTCAAACTAGC----------- 58542 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | |||||||||||||||| |||||||||||||||| ||| ||||||||||||| Sbjct 58541 ------CCTCTTTCCCCGCTGATTTGGCCAAGCCCGTTCCCTGGGCCGTGGTTTCGCTAG 58488 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct 58487 ATAGTAGATAGTGACAGTGATGATCTCGTTAATCCATTCATGCGCATCACTAATTAGACG 58428 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 |||||||||||||||||||| |||||||||| ||||||||||| || Sbjct 58427 ACGAGGCATTTGGCTACCTTGAGAGAGTCATGATTACTCCCGCCCTT 58381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194473024