Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq249 306 3e-78 seq50 141 7e-29 >seq249 Length=183263 Score = 306 bits (338), Expect = 3e-78 Identities = 642/952 (67%), Gaps = 10/952 (1%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| || || |||| || || | |||||| || || | ||| || || || || Sbjct 118052 ACAAACGATGGCAGAGCAACGGAAGCCAAGTTGCAAACGGCAACCTCATCTGGCGCTGTG 118111 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || |||| || || |||||||| || || ||| ||||| || | |||| || || Sbjct 118112 TATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTG 118171 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| | ||| ||||||||||| | |||| | || |||| ||||| || | | Sbjct 118172 CTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCC 118231 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGC----CCTACCTTT 66228 || | |||||| | ||| |||| || ||| | || ||| | || | Sbjct 118232 TCGAGGATGGCATACCA--GAGCTTTTGGG--CACGGACGGTCTCGCGACCCTTATTCTC 118287 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 | || || | ||||| ||| |||| || || | || || | |||| ||| Sbjct 118288 TCTCTCATACTTCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGACCTGG 118347 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 |||| || || ||||| |||| ||| || |||| || | ||||| |||| || || Sbjct 118348 GCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATGAAAAG 118407 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||| || ||||| ||||| ||||| | ||||| || || |||||| ||||||| || Sbjct 118408 ATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTT 118467 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || | |||||||||||| | |||| ||| || |||||||| || |||||||||||||| Sbjct 118468 CTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAA 118527 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 || || || ||| |||||| |||||||||||||| ||| |||||| ||||||| Sbjct 118528 CGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGTAGACACG 118587 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 | ||| || | ||| ||||| ||| | |||||||| || |||| ||| || || Sbjct 118588 AAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAGCCAGTGGC 118647 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || ||| ||||| ||||||||||| || || ||||| ||||| |||||| Sbjct 118648 ACGAATGCGGTGCACATTGAGACCAATACCGCCAGCAGTCTTGGAGATCAACGCACAAGT 118707 Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 || ||| | | || ||||||||| ||| |||| ||| | |||| |||| || Sbjct 118708 CTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGA 118767 Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 | ||| || |||||| | || |||||| || || | ||||| || ||||| Sbjct 118768 TGACATTTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTA 118827 Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 | | |||||||| | ||| ||||||||| | ||||||| || || || || Sbjct 118828 CTTTTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATACC 118887 Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCA 66887 | || ||||| || | || || || |||||| || | ||| ||||| | | Sbjct 118888 AACAGCGACGCGCATGAGCATGTGCTGTGGGCGTTCG-GCAACTTTTCCGTTGATGCGGA 118946 Query 66888 TTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | || ||||| ||||| ||||||| || ||| || ||| || || || Sbjct 118947 GGAGATATGAGCGCTCCAGTGTCTTGAAGCCGAAGAACTGGTAGTTAAAGTC 118998 Score = 141 bits (156), Expect = 7e-29 Identities = 329/486 (68%), Gaps = 14/486 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | | ||| ||| |||| | |||||||||||||||||| Sbjct 117155 TCGACGGTGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATGCCGGTC 117214 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 ||||| ||| ||| | ||| ||||| || | | || |||| | | ||||| Sbjct 117215 TTGAGACCAAGCTTCCATCCGGCGAAGTGCATGGA-GGTGATCTTGCCCATGGTAGGCTC 117273 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || |||| |||||| ||| || ||| | |||||| || || ||||| Sbjct 117274 CTTCATGTGGATGTTCAGTGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCAT 117333 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | |||||| ||| ||| || |||||||| |||||||| | | | | | | |||| Sbjct 117334 CTGAATGATGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAG-GTCTTGATCTCAT 117392 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCA-CGACGTGCAATAATGCGATTACGCATC 65374 || || | ||| ||||| |||||| || || || || ||||| || ||| Sbjct 117393 CAGGGATGTTGGGGATGCGCTGGATAGAACCACCGTCG-GCGATGATGCGGTTCTTCATG 117451 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGAT-GTTG---AACCAAGTGACGATTGATGAC 65430 ||| | ||| | ||||| |||| ||||| ||| ||||| | | |||| || Sbjct 117452 TTCTCGGTCCAAAGACCCATGTCGACAAGATCCTTGAGCAACCAGG----GGTTGACAAC 117507 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| || | || |||||||| |||||||| || ||| || || ||| | Sbjct 117508 CTGGAACTCACCAGCGAGCACACGACGAGAGTAGATGTTTGATGTGTATGGCTCGAAGCA 117567 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||||||| || || |||| ||| || ||||| ||||| || || || | || || Sbjct 117568 CTCGTTGTTGCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAACGAGCAGAGA 117627 Query 65551 GTTTCG 65556 ||| || Sbjct 117628 GTTGCG 117633 >seq50 Length=575836 Score = 141 bits (156), Expect = 7e-29 Identities = 295/438 (67%), Gaps = 11/438 (3%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | |||||||| | || |||||||||||||| || | ||||| ||| || Sbjct 303612 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGTGGATCGTTCGCGTCCATCTTCTGGCTG 303553 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| ||||| |||||| | || || || |||||| Sbjct 303552 AAGAAGCGTGGTCTGATGCCCGGTCTTACCTTTTCTAATGAGCTCATTTCTCGTGACGAG 303493 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 |||||||| || |||||| | || | || || |||| | || | ||||| Sbjct 303492 GGCATGCACACAGACTTTGCTTGTCTGTTGTT------CTCTCTGCTCAA-CAACCGTCC 303440 Query 61678 GAG----GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || || |||| | || | ||||| || || || ||||| || || Sbjct 303439 AAGCAAAGATGCTGTGCAGGCCATCATCACCGAGGCCGTCGAGATTGAGCAGGAGTTCCT 303380 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 | | || ||| | ||| | |||| |||| ||||| | || |||| ||||| || Sbjct 303379 GTCCGATGCTCTCCCCTGCGCACTACTCGGTATGAACGCTACTCTCATGTGCCAGTACAT 303320 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 || || || |||||||||||| | | | | | || | | ||| || ||| Sbjct 303319 CGAGTTCGTCGCCGACCGTCTGCTCCTGGCTCTTGGCAACCCCAAGTACTACAACGCGAC 303260 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || ||||| | |||||||| || || |||||||| Sbjct 303259 CAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAA 303200 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| || || || || Sbjct 303199 GCGTGTTGGTGATTACCA 303182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566362268320