Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq60 488 2e-135 seq67 322 2e-85 seq30 152 2e-34 seq3 149 2e-33 >seq60 Length=3881 Score = 488 bits (540), Expect = 2e-135 Identities = 285/295 (97%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 ||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1 CTACACCCCATATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTT 60 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 120 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 180 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 240 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 241 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 295 >seq67 Length=1899 Score = 322 bits (356), Expect = 2e-85 Identities = 195/206 (95%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 1694 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTGTG 1753 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1754 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1813 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct 1814 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGGCGGTGAAGCCCAGTTCCGCTTCATTGA 1873 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGT 212 |||||||||||||||||| |||||| Sbjct 1874 ATAAGTAAAAAAACGATAAAGGTAGT 1899 >seq30 Length=162096 Score = 152 bits (168), Expect = 2e-34 Identities = 139/176 (79%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 326 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 385 ||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 54251 AAGCCTGTTTTCCCGGCTGTGGTTTAGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 54192 Query 386 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC-------TACCTTAA 438 ||||| | || |||||||||||||| |||| | |||||||||||| | ||| Sbjct 54191 TAATCAACTCTTGCGCGTCACTAATGAGATTAAGAGGCATTTGGCTTTTTTTTTTTTTAC 54132 Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||| || |||| ||| ||| | |||||||||| | ||||| | |||| Sbjct 54131 AAGAGTCATGTTTCCTCCTGCCATTTCCTCGCGCTTGGTCGGGTTTCTATAATTTG 54076 >seq3 Length=4187442 Score = 149 bits (164), Expect = 2e-33 Identities = 143/187 (76%), Gaps = 20/187 (11%) Strand=Plus/Plus Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1295934 AGCCCGTTTTCCCAGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGCGAATCTCGTT 1295993 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC---------------- 430 |||| | ||||||||||||||||| |||| | |||||||||||| Sbjct 1295994 AATCAACTCATGCGCGTCACTAATGAGATTAAGAGGCATTTGGCTTTTTTTTTTTTTTTT 1296053 Query 431 ---TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 487 | ||| ||||||||| ||| |||| |||| |||| |||||||||||| ||||| Sbjct 1296054 TTTTTTTTTACGAGAGTCATGGTTCCTCCTGCCG-TTACTCGCGCTTGGTTGGGTTTCTG 1296112 Query 488 CACTTTG 494 | |||| Sbjct 1296113 TAATTTG 1296119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198724544