Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 seq16 132 4e-26 >seq9 Length=276411 Score = 140 bits (154), Expect = 3e-28 Identities = 296/437 (68%), Gaps = 5/437 (1%) Strand=Plus/Minus Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 |||| || || | || |||||| | || ||| ||||| || ||| | ||||| ||| Sbjct 245148 TGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTCTGGC 245089 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| | ||||||||||| || ||| ||| ||| | || || || || | Sbjct 245088 TGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATG 245029 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || ||| |||||| |||| ||| ||| | ||| || || || Sbjct 245028 AGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCT--CGC-ACCTGAACAACCGCCCCG 244972 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATTTCTG 61734 || ||||| || || | |||| | || || | || || |||| || ||| Sbjct 244971 ACCCTCAGATTGTGGAGGACGTTAT-CGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTG 244913 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 ||||||||| | || | | || | |||||||| | | |||| ||||| ||| Sbjct 244912 ACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATT 244853 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || ||||||||||| |||||| | | || | || | || ||| | | Sbjct 244852 GAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTCAATGCCACC 244793 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||||||||| |||||||||| || || |||| || ||||| || || |||||||| Sbjct 244792 AACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTCTTCGAGAAG 244733 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || || || || Sbjct 244732 CGTGTCGGTGATTACCA 244716 >seq16 Length=224152 Score = 132 bits (146), Expect = 4e-26 Identities = 243/351 (69%), Gaps = 14/351 (4%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 || |||||||| | || |||| | | ||||| || ||||||| ||| | ||| Sbjct 167231 TCAGCCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGCC 167172 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGC 65932 ||||| ||||||||||||||||||||||| || |||| || || || ||| ||| Sbjct 167171 TCAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGCACCTGC 167112 Query 65933 ACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACAC 65991 || | | ||| | ||| | || ||| | || | || |||| | | | Sbjct 167111 ACAACTTCGTGGAGCTTGC-CAAAGTCATA---TTCAC--CG--CGGG-----CAGCATC 167065 Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 || || |||| ||||||||||| || |||||||||||||| | ||| || ||||| || Sbjct 167064 AACGAAGGTGGGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGT 167005 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||| | ||||| || || || || || ||| || || |||| |||| || || Sbjct 167004 GTACTCAATGATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTT 166945 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 ||||| | || || ||||||||||||| |||| | ||| | || ||||| Sbjct 166944 GCTCTTTCTGTTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTC 166894 Score = 131 bits (144), Expect = 1e-25 Identities = 197/280 (70%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 |||||||||| |||||||||||||| |||| ||||| | ||||| || ||||| | Sbjct 166642 TCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGA 166583 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||||||||| |||| ||||| ||||| || |||| ||| ||||| || | || Sbjct 166582 GATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTG 166523 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 ||| ||| || || ||||| || || | || |||||||| || || | ||| | Sbjct 166522 GACGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGG 166463 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | || | || || || || ||||| || | ||| ||| || || || || Sbjct 166462 GAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGC 166403 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||| ||||| ||||| || ||||| || ||||||||||| Sbjct 166402 GGTGCACATTGAGACCGATTCCACCAGCGGTCTTCGAGAT 166363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563159485360