Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26]
999 sequences; 35,993,818 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq269 277 6e-72
seq806 113 1e-22
seq79 96.9 1e-17
seq148 78.8 3e-12
seq291 77.0 1e-11
seq273 77.0 1e-11
>seq269
Length=47960
Score = 277 bits (306), Expect = 6e-72
Identities = 165/172 (96%), Gaps = 3/172 (2%)
Strand=Plus/Minus
Query 372 AGTGGGAATCTCGTTA---ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
|||||||| |||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 22889 AGTGGGAAGATCGTCATCAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 22830
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 22829 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 22770
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 22769 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTT 22718
>seq806
Length=7442
Score = 113 bits (124), Expect = 1e-22
Identities = 64/65 (98%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 AGTTAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 181
Query 415 TGACG 419
|||||
Sbjct 182 TGACG 186
>seq79
Length=92920
Score = 96.9 bits (106), Expect = 1e-17
Identities = 59/63 (94%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331
|| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 65321 AATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCC 65262
Query 332 GTT 334
|||
Sbjct 65261 GTT 65259
>seq148
Length=71340
Score = 78.8 bits (86), Expect = 3e-12
Identities = 64/77 (83%), Gaps = 3/77 (4%)
Strand=Plus/Minus
Query 201 GATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCA 260
||||| ||||||||||||||||| |||||| | |||||||| ||||||||||| | |
Sbjct 69839 GATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTATTCTACACCCCATA 69783
Query 261 AGTCATTTCACAAAGTC 277
||| |||||||| |||
Sbjct 69782 TGTCTTTTCACAATGTC 69766
>seq291
Length=45525
Score = 77.0 bits (84), Expect = 1e-11
Identities = 42/42 (100%), Gaps = 0/42 (0%)
Strand=Plus/Minus
Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370
||||||||||||||||||||||||||||||||||||||||||
Sbjct 4455 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 4414
>seq273
Length=47646
Score = 77.0 bits (84), Expect = 1e-11
Identities = 48/52 (92%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 157 GGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGG 208
|| |||||||| |||||||||||||||||| |||||||||||||||||| ||
Sbjct 22769 GGGCGGTGAAGCCCAGTTCCGCTTCATTGAATAAGTAAAAAAACGATAAAGG 22718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635183664352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |