Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576795.1_202016-02-26]
670 sequences; 36,578,698 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq565 98.7 2e-18
seq312 98.7 2e-18
seq2 93.3 7e-17
seq80 89.7 8e-16
seq660 77.0 5e-12
seq437 73.4 6e-11
>seq565
Length=485
Score = 98.7 bits (108), Expect = 2e-18
Identities = 59/62 (95%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 264 TTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCC 205
Query 229 AT 230
||
Sbjct 204 AT 203
>seq312
Length=3354
Score = 98.7 bits (108), Expect = 2e-18
Identities = 54/54 (100%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 1372
>seq2
Length=676948
Score = 93.3 bits (102), Expect = 7e-17
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||
Sbjct 380458 TCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGAAAGAGCTCTCAATC 380399
Query 255 TGTC 258
||||
Sbjct 380398 TGTC 380395
>seq80
Length=157725
Score = 89.7 bits (98), Expect = 8e-16
Identities = 63/71 (89%), Gaps = 1/71 (1%)
Strand=Plus/Minus
Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101
|||||||||||||||||||||||||||||||| | |||||||| |||| | |||| |||
Sbjct 157442 ACATCTAAGGGCATCACAGACCTGTTATTGCCGCGCACTTCCATCGGCTTG-AGCCGATA 157384
Query 102 GTCCCTCTAAG 112
||||| |||||
Sbjct 157383 GTCCCCCTAAG 157373
>seq660
Length=231
Score = 77.0 bits (84), Expect = 5e-12
Identities = 73/92 (79%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 108 CTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167
||||||||||||| || | | | || |||||||||| || |||||||||||
Sbjct 6 CTAAGAAGCCAGCGGCCCGCAAACGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTC 64
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCAC 199
||||||| |||||| |||||||||||||||||
Sbjct 65 GTTATCGCAATTAAGCAGACAAATCACTCCAC 96
>seq437
Length=1000
Score = 73.4 bits (80), Expect = 6e-11
Identities = 44/45 (98%), Gaps = 1/45 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC-ATCAC 58
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 799 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAATCAC 755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796794828270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |