Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4334 482 4e-134 seq4542 311 2e-82 seq4340 251 1e-64 seq5135 215 9e-54 seq5224 102 1e-19 seq4934 102 1e-19 >seq4334 Length=1583 Score = 482 bits (534), Expect = 4e-134 Identities = 296/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 1209 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 1267 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1268 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 1327 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1328 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1387 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1388 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 1447 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| || Sbjct 1448 ATTTGCTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGA 1507 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1508 ACGAAAGTTAGGGG 1521 >seq4542 Length=1341 Score = 311 bits (344), Expect = 2e-82 Identities = 189/199 (95%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 1144 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 1202 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1203 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 1262 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1322 Query 185 AATGATTAATAGGGATAGT 203 ||||||||||||||||||| Sbjct 1323 AATGATTAATAGGGATAGT 1341 >seq4340 Length=1575 Score = 251 bits (278), Expect = 1e-64 Identities = 156/166 (94%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 1411 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 1469 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1470 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 1529 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 170 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1530 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 1575 >seq5135 Length=820 Score = 215 bits (238), Expect = 9e-54 Identities = 136/146 (93%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 675 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 733 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 734 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 793 Query 125 TAGCATGGAATAATAGAATAGGACGT 150 |||||||||||||||||||||||||| Sbjct 794 TAGCATGGAATAATAGAATAGGACGT 819 >seq5224 Length=759 Score = 102 bits (112), Expect = 1e-19 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 82 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTG-GGGGGA 24 Query 65 GCCAGGACTTTTACTTTGAAAAA 87 |||||||||||||| ||||||| Sbjct 23 ACCAGGACTTTTACTGTGAAAAA 1 >seq4934 Length=975 Score = 102 bits (112), Expect = 1e-19 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 82 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTG-GGGGGA 24 Query 65 GCCAGGACTTTTACTTTGAAAAA 87 |||||||||||||| ||||||| Sbjct 23 ACCAGGACTTTTACTGTGAAAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915141216704