Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27]
6,423 sequences; 35,784,535 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq5406 221 2e-55
seq3827 214 3e-53
>seq5406
Length=631
Score = 221 bits (244), Expect = 2e-55
Identities = 181/214 (85%), Gaps = 7/214 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 210 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 153
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 152 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 93
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCC-CCG 177
||||| || ||| || |||| ||||||| |||||||||||||| || |||| |
Sbjct 92 GAACGCGGCGATGTAGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGG 33
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGA 211
|||| ||||||| ||| |||| ||||| |||
Sbjct 32 CACCTCAGCAGGCTGGCGACGG--CTCCCGGGGA 1
>seq3827
Length=2289
Score = 214 bits (236), Expect = 3e-53
Identities = 185/223 (83%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 2289 TGCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCC 2230
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCG 177
||||| || ||| | || |||| ||||||| |||||||||||||| || |||| ||
Sbjct 2229 GGAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACG 2170
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGA 235
||||| ||||||| ||| || ||| |||| | |||| | ||||| ||| |||||||||
Sbjct 2169 AACCTCAGCAGGCTGGCGAC-GGCTCCCCGGGAGAAGCCCCGGGGAGCT-GGCTGGCGGA 2112
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||||| |||| ||||| |||||| |||| |||||
Sbjct 2111 TTGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCATACGAC 2069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819149027072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |